RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 SSH3Q8TE77 659 aa12.97□□□□□ -0.33
VWA3A-201ENST00000299840 MYH13Q9UKX3 1938 aa12.96□□□□□ -0.33
VWA3A-201ENST00000299840 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
VWA3A-201ENST00000299840 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
VWA3A-201ENST00000299840 TXNRD3Q86VQ6 643 aa12.96□□□□□ -0.33
VWA3A-201ENST00000299840 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
VWA3A-201ENST00000299840 COG6Q9Y2V7 657 aa12.96□□□□□ -0.33
VWA3A-201ENST00000299840 G3V3G9 751 aa12.96□□□□□ -0.34
VWA3A-201ENST00000299840 VIL1P09327 827 aaKnown RBP12.96□□□□□ -0.34
VWA3A-201ENST00000299840 FGFR2P21802 821 aa12.96□□□□□ -0.34
VWA3A-201ENST00000299840 ATP2B3Q16720 1220 aa12.96□□□□□ -0.34
VWA3A-201ENST00000299840 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.34
VWA3A-201ENST00000299840 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.34
VWA3A-201ENST00000299840 PNMA6EA0A0J9YXQ4 647 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 RPS12P25398 132 aaKnown RBP12.95□□□□□ -0.34
VWA3A-201ENST00000299840 KLRK1P26718 216 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 SSR1P43307 286 aaKnown RBP12.95□□□□□ -0.34
VWA3A-201ENST00000299840 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
VWA3A-201ENST00000299840 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 DPF2Q92785 391 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 HACL1Q9UJ83 578 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 GJA3Q9Y6H8 435 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 PSMD14O00487 310 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 RAD17O75943 681 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 TOMM70O94826 608 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 IL1R1P14778 569 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 ARID4AP29374 1257 aaPredicted RBP12.95□□□□□ -0.34
VWA3A-201ENST00000299840 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
VWA3A-201ENST00000299840 SCNN1DP51172 638 aa12.95□□□□□ -0.34
VWA3A-201ENST00000299840 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
VWA3A-201ENST00000299840 PA2G4Q9UQ80 394 aaKnown RBP12.95□□□□□ -0.34
VWA3A-201ENST00000299840 SNAP23O00161 211 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
VWA3A-201ENST00000299840 CEP85Q6P2H3 762 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 ZNF804AQ7Z570 1209 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 TAF1DQ9H5J8 278 aaPredicted RBP12.94□□□□□ -0.34
VWA3A-201ENST00000299840 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
VWA3A-201ENST00000299840 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 SGSM3Q96HU1 749 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 GPRC5DQ9NZD1 345 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 CEP126Q9P2H0 1117 aa12.94□□□□□ -0.34
VWA3A-201ENST00000299840 LMOD1P29536 600 aaPredicted RBP12.93□□□□□ -0.34
VWA3A-201ENST00000299840 GMPSP49915 693 aaPredicted RBP12.93□□□□□ -0.34
VWA3A-201ENST00000299840 STRIP1Q5VSL9 837 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 FBXO33Q7Z6M2 555 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
VWA3A-201ENST00000299840 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 RSBN1LQ6PCB5 846 aaPredicted RBP12.93□□□□□ -0.34
VWA3A-201ENST00000299840 CASC1Q6TDU7 716 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 C16orf71Q8IYS4 520 aaPredicted RBP12.93□□□□□ -0.34
VWA3A-201ENST00000299840 LPIN2Q92539 896 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 FAM84BQ96KN1 310 aaPredicted RBP12.93□□□□□ -0.34
VWA3A-201ENST00000299840 GMLQ99445 158 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 SIL1Q9H173 461 aa12.93□□□□□ -0.34
VWA3A-201ENST00000299840 EPHX2P34913 555 aa12.92□□□□□ -0.34
VWA3A-201ENST00000299840 FKBP1AP62942 108 aaKnown RBP12.92□□□□□ -0.34
VWA3A-201ENST00000299840 PNMA8AQ86V59 439 aaPredicted RBP12.92□□□□□ -0.34
VWA3A-201ENST00000299840 TDRD7Q8NHU6 1098 aaKnown RBP12.92□□□□□ -0.34
VWA3A-201ENST00000299840 IFIT1P09914 478 aaKnown RBP12.92□□□□□ -0.34
VWA3A-201ENST00000299840 HIBADHP31937 336 aaKnown RBP12.92□□□□□ -0.34
VWA3A-201ENST00000299840 FSTL1Q12841 308 aa12.92□□□□□ -0.34
VWA3A-201ENST00000299840 DACT2Q5SW24 774 aa12.92□□□□□ -0.34
VWA3A-201ENST00000299840 CALCOCO1Q9P1Z2 691 aa12.92□□□□□ -0.34
VWA3A-201ENST00000299840 FAM205AQ6ZU69 1335 aa12.92□□□□□ -0.34
VWA3A-201ENST00000299840 MYO3BQ8WXR4 1341 aa12.92□□□□□ -0.34
VWA3A-201ENST00000299840 POLR2AP24928 1970 aaKnown RBP12.91□□□□□ -0.34
VWA3A-201ENST00000299840 SLC5A1P13866 664 aa12.91□□□□□ -0.34
VWA3A-201ENST00000299840 EPS15P42566 896 aa12.91□□□□□ -0.34
VWA3A-201ENST00000299840 G3BP1Q13283 466 aaKnown RBP eCLIP12.91□□□□□ -0.34
VWA3A-201ENST00000299840 USP50Q70EL3 339 aaPredicted RBP12.91□□□□□ -0.34
VWA3A-201ENST00000299840 ADARB2Q9NS39 739 aaKnown RBP12.91□□□□□ -0.34
VWA3A-201ENST00000299840 C1QTNF8P60827 252 aa12.91□□□□□ -0.34
VWA3A-201ENST00000299840 BECN1Q14457 450 aa12.91□□□□□ -0.34
VWA3A-201ENST00000299840 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
VWA3A-201ENST00000299840 SASH1O94885 1247 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 CSPP1Q1MSJ5 1256 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 CAVIN4Q5BKX8 364 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 ZNF513Q8N8E2 541 aaPredicted RBP12.9□□□□□ -0.34
VWA3A-201ENST00000299840 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
VWA3A-201ENST00000299840 CNOT7Q9UIV1 285 aaKnown RBP12.9□□□□□ -0.34
VWA3A-201ENST00000299840 AKAP2Q9Y2D5 859 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 GYG1P46976 350 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 ZNF280AP59817 542 aaPredicted RBP12.9□□□□□ -0.34
VWA3A-201ENST00000299840 ZKSCAN8Q15776 578 aaPredicted RBP12.9□□□□□ -0.34
VWA3A-201ENST00000299840 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 SMC1BQ8NDV3 1235 aa12.9□□□□□ -0.34
VWA3A-201ENST00000299840 GZF1Q9H116 711 aaPredicted RBP12.9□□□□□ -0.34
VWA3A-201ENST00000299840 H7C1D1 291 aa12.89□□□□□ -0.35
VWA3A-201ENST00000299840 MFAP1P55081 439 aaKnown RBP12.89□□□□□ -0.35
VWA3A-201ENST00000299840 TFCP2Q12800 502 aa12.89□□□□□ -0.35
VWA3A-201ENST00000299840 HMMRO75330 724 aa12.89□□□□□ -0.35
VWA3A-201ENST00000299840 GABPB1Q06547 395 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms