RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 SPATA5Q8NB90 893 aa15.84■□□□□ 0.13
CDH8-201ENST00000299345 IFIT3O14879 490 aaKnown RBP15.83■□□□□ 0.13
CDH8-201ENST00000299345 ZBTB43O43298 467 aa15.83■□□□□ 0.13
CDH8-201ENST00000299345 FDPSP14324 419 aaKnown RBP15.83■□□□□ 0.13
CDH8-201ENST00000299345 SART3Q15020 963 aaKnown RBP15.83■□□□□ 0.13
CDH8-201ENST00000299345 SLC4A9Q96Q91 983 aa15.83■□□□□ 0.13
CDH8-201ENST00000299345 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.13
CDH8-201ENST00000299345 WWC3Q9ULE0 1092 aa15.83■□□□□ 0.13
CDH8-201ENST00000299345 ERICH2A1L162 156 aa15.83■□□□□ 0.12
CDH8-201ENST00000299345 GOLGA8AA7E2F4 631 aa15.83■□□□□ 0.12
CDH8-201ENST00000299345 MBD4O95243 580 aa15.83■□□□□ 0.12
CDH8-201ENST00000299345 PCDHA7Q9UN72 937 aa15.83■□□□□ 0.12
CDH8-201ENST00000299345 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDH8-201ENST00000299345 ADD1P35611 737 aaKnown RBP15.83■□□□□ 0.12
CDH8-201ENST00000299345 ZNF75DP51815 510 aa15.83■□□□□ 0.12
CDH8-201ENST00000299345 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
CDH8-201ENST00000299345 TDRD7Q8NHU6 1098 aaKnown RBP15.82■□□□□ 0.12
CDH8-201ENST00000299345 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 SLC12A7Q9Y666 1083 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 TPM4P67936 248 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 MYSM1Q5VVJ2 828 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 SNAP23O00161 211 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 ANTXR2P58335 489 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 ADALQ6DHV7 355 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 RBM43Q6ZSC3 357 aaKnown RBP15.82■□□□□ 0.12
CDH8-201ENST00000299345 JMYQ8N9B5 988 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 GJB4Q9NTQ9 266 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 ABCF2Q9UG63 623 aa15.82■□□□□ 0.12
CDH8-201ENST00000299345 EVCP57679 992 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 VPS37DQ86XT2 251 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 TMEM87BQ96K49 555 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 GOLPH3LQ9H4A5 285 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 ARMT1Q9H993 441 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 NUTM2BA6NNL0 878 aaPredicted RBP15.81■□□□□ 0.12
CDH8-201ENST00000299345 NUTM2EB1AL46 878 aaPredicted RBP15.81■□□□□ 0.12
CDH8-201ENST00000299345 SAFBQ15424 915 aaKnown RBP eCLIP15.81■□□□□ 0.12
CDH8-201ENST00000299345 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 NUTM2AQ8IVF1 878 aaPredicted RBP15.81■□□□□ 0.12
CDH8-201ENST00000299345 FBXL16Q8N461 479 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 ERCC4Q92889 916 aaPredicted RBP15.81■□□□□ 0.12
CDH8-201ENST00000299345 ZNF512BQ96KM6 892 aaPredicted RBP15.81■□□□□ 0.12
CDH8-201ENST00000299345 SEC31BQ9NQW1 1179 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 CLIC4Q9Y696 253 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 YEATS4O95619 227 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 MFSD6Q6ZSS7 791 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 TBC1D10CQ8IV04 446 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 SALL1Q9NSC2 1324 aa15.81■□□□□ 0.12
CDH8-201ENST00000299345 DYNC1I1O14576 645 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 PARP10Q53GL7 1025 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 PRIMPOLQ96LW4 560 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 PYCARDQ9ULZ3 195 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 IQSEC3Q9UPP2 1182 aaPredicted RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 BCL9O00512 1426 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 PATL2C9JE40 543 aaKnown RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 FOXP2O15409 715 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 ANO1Q5XXA6 986 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 FILIP1Q7Z7B0 1213 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 ZNF34Q8IZ26 560 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 PHKBQ93100 1093 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 CDCA7Q9BWT1 371 aaPredicted RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 SLC4A4Q9Y6R1 1079 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 UBN2Q6ZU65 1347 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 SLC3A2P08195 630 aaKnown RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 MARCKSP29966 332 aaPredicted RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 STRBPQ96SI9 672 aaKnown RBP15.8■□□□□ 0.12
CDH8-201ENST00000299345 HPS5Q9UPZ3 1129 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 ZNF652Q9Y2D9 606 aa15.8■□□□□ 0.12
CDH8-201ENST00000299345 RIC1Q4ADV7 1423 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 ZMYM6O95789 1325 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 C11orf57Q6ZUT1 292 aaPredicted RBP15.79■□□□□ 0.12
CDH8-201ENST00000299345 TRIM22Q8IYM9 498 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 IFNL3Q8IZI9 196 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 KIAA1524Q8TCG1 905 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 SLC26A6Q9BXS9 759 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 CNNM2Q9H8M5 875 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 GNL3LQ9NVN8 582 aaKnown RBP15.79■□□□□ 0.12
CDH8-201ENST00000299345 RAI14Q9P0K7 980 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 WDR19Q8NEZ3 1342 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 ARID4AP29374 1257 aaPredicted RBP15.79■□□□□ 0.12
CDH8-201ENST00000299345 CTDSPL2Q05D32 466 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 RASGRF1Q13972 1273 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 APOA5Q6Q788 366 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 AK7Q96M32 723 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 MYL10Q9BUA6 226 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 DNAJC5Q9H3Z4 198 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 A0A087WWV3 80 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 BIN1O00499 593 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 SSRP1Q08945 709 aaKnown RBP15.79■□□□□ 0.12
CDH8-201ENST00000299345 CYB5R4Q7L1T6 521 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 CCDC82Q8N4S0 544 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 AOPEPQ8N6M6 819 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 KRT23Q9C075 422 aa15.79■□□□□ 0.12
CDH8-201ENST00000299345 LOC102724428A0A0B4J2F2 783 aa15.78■□□□□ 0.12
CDH8-201ENST00000299345 A0A1W2PQ27 194 aa15.78■□□□□ 0.12
CDH8-201ENST00000299345 A0A1W2PQ64 194 aa15.78■□□□□ 0.12
CDH8-201ENST00000299345 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
CDH8-201ENST00000299345 SH2B2O14492 632 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms