RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 TEPSINQ96N21 525 aa31.56■■■□□ 2.64
U2AF1-201ENST00000291552 LRRFIP2Q9Y608 721 aaKnown RBP31.56■■■□□ 2.64
U2AF1-201ENST00000291552 USP2O75604 605 aaPredicted RBP31.55■■■□□ 2.64
U2AF1-201ENST00000291552 MEIS3Q99687 375 aa31.55■■■□□ 2.64
U2AF1-201ENST00000291552 PPP1R12BO60237 982 aaPredicted RBP31.54■■■□□ 2.64
U2AF1-201ENST00000291552 FRAT2O75474 233 aaPredicted RBP31.54■■■□□ 2.64
U2AF1-201ENST00000291552 SIL1Q9H173 461 aa31.54■■■□□ 2.64
U2AF1-201ENST00000291552 SREBF2Q12772 1141 aa31.53■■■□□ 2.64
U2AF1-201ENST00000291552 TNFAIP1Q13829 316 aa31.53■■■□□ 2.64
U2AF1-201ENST00000291552 SLC10A4Q96EP9 437 aa31.53■■■□□ 2.64
U2AF1-201ENST00000291552 WNK4Q96J92 1243 aa31.53■■■□□ 2.64
U2AF1-201ENST00000291552 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.53■■■□□ 2.64
U2AF1-201ENST00000291552 TCP10L2B9ZVM9 353 aa31.52■■■□□ 2.64
U2AF1-201ENST00000291552 CIAO1O76071 339 aa31.52■■■□□ 2.64
U2AF1-201ENST00000291552 SLC5A1P13866 664 aa31.52■■■□□ 2.64
U2AF1-201ENST00000291552 HDLBPQ00341 1268 aaKnown RBP31.52■■■□□ 2.64
U2AF1-201ENST00000291552 LPIN2Q92539 896 aa31.52■■■□□ 2.64
U2AF1-201ENST00000291552 R3HDMLQ9H3Y0 253 aa31.52■■■□□ 2.64
U2AF1-201ENST00000291552 PA2G4Q9UQ80 394 aaKnown RBP31.52■■■□□ 2.64
U2AF1-201ENST00000291552 GJA5P36382 358 aa31.51■■■□□ 2.63
U2AF1-201ENST00000291552 CTU1Q7Z7A3 348 aaKnown RBP31.51■■■□□ 2.63
U2AF1-201ENST00000291552 ZNF296Q8WUU4 475 aaPredicted RBP31.51■■■□□ 2.63
U2AF1-201ENST00000291552 TMEM39BQ9GZU3 492 aa31.51■■■□□ 2.63
U2AF1-201ENST00000291552 UNCXA6NJT0 531 aa31.5■■■□□ 2.63
U2AF1-201ENST00000291552 ZBTB48P10074 688 aaPredicted RBP31.5■■■□□ 2.63
U2AF1-201ENST00000291552 CFHR5Q9BXR6 569 aa31.5■■■□□ 2.63
U2AF1-201ENST00000291552 FBXO3Q9UK99 471 aa31.5■■■□□ 2.63
U2AF1-201ENST00000291552 TNNQ9UQP3 1299 aa31.5■■■□□ 2.63
U2AF1-201ENST00000291552 IREB2P48200 963 aaKnown RBP31.49■■■□□ 2.63
U2AF1-201ENST00000291552 CACNB3P54284 484 aa31.49■■■□□ 2.63
U2AF1-201ENST00000291552 INTS3Q68E01 1043 aaKnown RBP31.49■■■□□ 2.63
U2AF1-201ENST00000291552 ARHGAP45Q92619 1136 aa31.49■■■□□ 2.63
U2AF1-201ENST00000291552 TEKT1Q969V4 418 aa31.49■■■□□ 2.63
U2AF1-201ENST00000291552 ZDHHC15Q96MV8 337 aa31.49■■■□□ 2.63
U2AF1-201ENST00000291552 RGS19P49795 217 aa31.48■■■□□ 2.63
U2AF1-201ENST00000291552 ATP2B3Q16720 1220 aa31.48■■■□□ 2.63
U2AF1-201ENST00000291552 MANSC4A6NHS7 340 aaPredicted RBP31.47■■■□□ 2.63
U2AF1-201ENST00000291552 GPR25O00155 361 aa31.47■■■□□ 2.63
U2AF1-201ENST00000291552 NOM1Q5C9Z4 860 aaKnown RBP31.47■■■□□ 2.63
U2AF1-201ENST00000291552 APOBEC3HQ6NTF7 200 aaKnown RBP31.47■■■□□ 2.63
U2AF1-201ENST00000291552 MRIQ9BWK5 157 aa31.47■■■□□ 2.63
U2AF1-201ENST00000291552 SUGT1Q9Y2Z0 365 aa31.47■■■□□ 2.63
U2AF1-201ENST00000291552 IGF2BP3O00425 579 aaKnown RBP eCLIP31.46■■■□□ 2.63
U2AF1-201ENST00000291552 ANKRD13AQ8IZ07 590 aa31.46■■■□□ 2.63
U2AF1-201ENST00000291552 COPRSQ9NQ92 184 aa31.46■■■□□ 2.63
U2AF1-201ENST00000291552 CEP126Q9P2H0 1117 aa31.46■■■□□ 2.63
U2AF1-201ENST00000291552 IFNL1Q8IU54 200 aa31.45■■■□□ 2.63
U2AF1-201ENST00000291552 MAST3O60307 1309 aa31.45■■■□□ 2.62
U2AF1-201ENST00000291552 TRIM27P14373 513 aa31.44■■■□□ 2.62
U2AF1-201ENST00000291552 IL15P40933 162 aaPredicted RBP31.44■■■□□ 2.62
U2AF1-201ENST00000291552 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.44■■■□□ 2.62
U2AF1-201ENST00000291552 BCAR3O75815 825 aa31.43■■■□□ 2.62
U2AF1-201ENST00000291552 TNNI2P48788 182 aa31.43■■■□□ 2.62
U2AF1-201ENST00000291552 HHIPL2Q6UWX4 724 aa31.43■■■□□ 2.62
U2AF1-201ENST00000291552 WDR66Q8TBY9 1149 aa31.43■■■□□ 2.62
U2AF1-201ENST00000291552 ELP3Q9H9T3 547 aa31.43■■■□□ 2.62
U2AF1-201ENST00000291552 MYH2Q9UKX2 1941 aa31.43■■■□□ 2.62
U2AF1-201ENST00000291552 ADORA1P30542 326 aa31.42■■■□□ 2.62
U2AF1-201ENST00000291552 PHKA1P46020 1223 aa31.42■■■□□ 2.62
U2AF1-201ENST00000291552 HDAC5Q9UQL6 1122 aa31.42■■■□□ 2.62
U2AF1-201ENST00000291552 TNRC18O15417 2968 aaPredicted RBP31.41■■■□□ 2.62
U2AF1-201ENST00000291552 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.41■■■□□ 2.62
U2AF1-201ENST00000291552 CNKSR2Q8WXI2 1034 aa31.41■■■□□ 2.62
U2AF1-201ENST00000291552 PRDX5P30044 214 aa31.4■■■□□ 2.62
U2AF1-201ENST00000291552 INHBEP58166 350 aa31.4■■■□□ 2.62
U2AF1-201ENST00000291552 MTX1Q13505 466 aa31.4■■■□□ 2.62
U2AF1-201ENST00000291552 VGLL4Q14135 290 aa31.4■■■□□ 2.62
U2AF1-201ENST00000291552 FKBP1CQ5VVH2 108 aa31.4■■■□□ 2.62
U2AF1-201ENST00000291552 DAGLAQ9Y4D2 1042 aa31.4■■■□□ 2.62
U2AF1-201ENST00000291552 AK9Q5TCS8 1911 aa31.39■■■□□ 2.62
U2AF1-201ENST00000291552 ALDH1A1P00352 501 aa31.39■■■□□ 2.62
U2AF1-201ENST00000291552 GNAI3P08754 354 aa31.39■■■□□ 2.62
U2AF1-201ENST00000291552 DIXDC1Q155Q3 683 aa31.39■■■□□ 2.62
U2AF1-201ENST00000291552 MIER1Q8N108 512 aa31.39■■■□□ 2.62
U2AF1-201ENST00000291552 OPTNQ96CV9 577 aa31.39■■■□□ 2.62
U2AF1-201ENST00000291552 RPAP1Q9BWH6 1393 aaPredicted RBP31.39■■■□□ 2.62
U2AF1-201ENST00000291552 HTTP42858 3142 aa31.39■■■□□ 2.62
U2AF1-201ENST00000291552 FKTNO75072 461 aa31.38■■■□□ 2.61
U2AF1-201ENST00000291552 ATF7IPQ6VMQ6 1270 aa31.38■■■□□ 2.61
U2AF1-201ENST00000291552 FAM83AQ86UY5 434 aa31.38■■■□□ 2.61
U2AF1-201ENST00000291552 PTPN18Q99952 460 aa31.38■■■□□ 2.61
U2AF1-201ENST00000291552 TESPA1A2RU30 521 aaPredicted RBP31.37■■■□□ 2.61
U2AF1-201ENST00000291552 SRGAP3O43295 1099 aa31.37■■■□□ 2.61
U2AF1-201ENST00000291552 MLLT1Q03111 559 aaPredicted RBP31.37■■■□□ 2.61
U2AF1-201ENST00000291552 TMOD2Q9NZR1 351 aa31.37■■■□□ 2.61
U2AF1-201ENST00000291552 HPS5Q9UPZ3 1129 aa31.37■■■□□ 2.61
U2AF1-201ENST00000291552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.37■■■□□ 2.61
U2AF1-201ENST00000291552 SALL1Q9NSC2 1324 aa31.37■■■□□ 2.61
U2AF1-201ENST00000291552 MAP3K9P80192 1104 aa31.36■■■□□ 2.61
U2AF1-201ENST00000291552 FRAT1Q92837 279 aaPredicted RBP31.36■■■□□ 2.61
U2AF1-201ENST00000291552 MS4A4AQ96JQ5 239 aa31.36■■■□□ 2.61
U2AF1-201ENST00000291552 ZBTB22O15209 634 aa31.35■■■□□ 2.61
U2AF1-201ENST00000291552 IPO8O15397 1037 aaKnown RBP31.35■■■□□ 2.61
U2AF1-201ENST00000291552 SOX10P56693 466 aa31.35■■■□□ 2.61
U2AF1-201ENST00000291552 CCDC102BQ68D86 513 aa31.35■■■□□ 2.61
U2AF1-201ENST00000291552 GNL3LQ9NVN8 582 aaKnown RBP31.35■■■□□ 2.61
U2AF1-201ENST00000291552 SEMA3EO15041 775 aa31.34■■■□□ 2.61
U2AF1-201ENST00000291552 CLUAP1Q96AJ1 413 aa31.34■■■□□ 2.61
U2AF1-201ENST00000291552 DENND2AQ9ULE3 1009 aa31.34■■■□□ 2.61
U2AF1-201ENST00000291552 SNCAIPQ9Y6H5 919 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms