RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 PCDHAC2Q9Y5I4 1007 aa12.21□□□□□ -0.45
CCDC58-201ENST00000291458 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
CCDC58-201ENST00000291458 IPO8O15397 1037 aaKnown RBP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 HIBADHP31937 336 aaKnown RBP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 RFX5P48382 616 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 RBM5P52756 815 aaKnown RBP eCLIP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 HUNKP57058 714 aa12.2□□□□□ -0.46
CCDC58-201ENST00000291458 UBE4AQ14139 1066 aa12.2□□□□□ -0.46
CCDC58-201ENST00000291458 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
CCDC58-201ENST00000291458 C15orf52Q6ZUT6 534 aaKnown RBP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 AIDAQ96BJ3 306 aa12.2□□□□□ -0.46
CCDC58-201ENST00000291458 GBA2Q9HCG7 927 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
CCDC58-201ENST00000291458 CLRN2A0PK11 232 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 EYA2O00167 538 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 WNT10BO00744 389 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 FOXN1O15353 648 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 IL1R1P14778 569 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 BRPF1P55201 1214 aaPredicted RBP12.19□□□□□ -0.46
CCDC58-201ENST00000291458 MFSD14BQ5SR56 506 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 ZKSCAN2Q63HK3 967 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
CCDC58-201ENST00000291458 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 PDCD7Q8N8D1 485 aaKnown RBP12.19□□□□□ -0.46
CCDC58-201ENST00000291458 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 PAPPA2Q9BXP8 1791 aa12.19□□□□□ -0.46
CCDC58-201ENST00000291458 SLC5A1P13866 664 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 ECE1P42892 770 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 BCAMP50895 628 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 PTPN12Q05209 780 aaKnown RBP12.18□□□□□ -0.46
CCDC58-201ENST00000291458 PRKG1Q13976 671 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 TTLL12Q14166 644 aaPredicted RBP12.18□□□□□ -0.46
CCDC58-201ENST00000291458 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
CCDC58-201ENST00000291458 DLGAP5Q15398 846 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 COL13A1Q5TAT6 717 aaPredicted RBP12.18□□□□□ -0.46
CCDC58-201ENST00000291458 INTS3Q68E01 1043 aaKnown RBP12.18□□□□□ -0.46
CCDC58-201ENST00000291458 MOB2Q70IA6 237 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 SAPCD2Q86UD0 394 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 ARHGAP45Q92619 1136 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
CCDC58-201ENST00000291458 C1orf115Q9H7X2 142 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 VEZTQ9HBM0 779 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 TSKSQ9UJT2 592 aa12.18□□□□□ -0.46
CCDC58-201ENST00000291458 AOX1Q06278 1338 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 PDE8BO95263 885 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 GNAI3P08754 354 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 IFIT1P09914 478 aaKnown RBP12.17□□□□□ -0.46
CCDC58-201ENST00000291458 CFAP100Q494V2 611 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 ATG9AQ7Z3C6 839 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 ITPRIPQ8IWB1 547 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 C2orf69Q8N8R5 385 aa12.17□□□□□ -0.46
CCDC58-201ENST00000291458 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
CCDC58-201ENST00000291458 COL1A1P02452 1464 aaPredicted RBP12.16□□□□□ -0.46
CCDC58-201ENST00000291458 GRIK5Q16478 980 aa12.16□□□□□ -0.46
CCDC58-201ENST00000291458 ATP2B3Q16720 1220 aa12.16□□□□□ -0.46
CCDC58-201ENST00000291458 TDRD7Q8NHU6 1098 aaKnown RBP12.16□□□□□ -0.46
CCDC58-201ENST00000291458 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
CCDC58-201ENST00000291458 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
CCDC58-201ENST00000291458 FZD1Q9UP38 647 aa12.16□□□□□ -0.46
CCDC58-201ENST00000291458 PITPNM2Q9BZ72 1349 aa12.15□□□□□ -0.46
CCDC58-201ENST00000291458 GTPBP6O43824 516 aaPredicted RBP12.15□□□□□ -0.46
CCDC58-201ENST00000291458 RLBP1P12271 317 aa12.15□□□□□ -0.46
CCDC58-201ENST00000291458 ADORA1P30542 326 aa12.15□□□□□ -0.46
CCDC58-201ENST00000291458 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
CCDC58-201ENST00000291458 CEP126Q9P2H0 1117 aa12.15□□□□□ -0.46
CCDC58-201ENST00000291458 HDAC5Q9UQL6 1122 aa12.15□□□□□ -0.46
CCDC58-201ENST00000291458 FAM205AQ6ZU69 1335 aa12.14□□□□□ -0.47
CCDC58-201ENST00000291458 GNAI2P04899 355 aa12.14□□□□□ -0.47
CCDC58-201ENST00000291458 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
CCDC58-201ENST00000291458 LBX1P52954 281 aa12.14□□□□□ -0.47
CCDC58-201ENST00000291458 RGMBQ6NW40 437 aa12.14□□□□□ -0.47
CCDC58-201ENST00000291458 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
CCDC58-201ENST00000291458 DZIP1LQ8IYY4 767 aaKnown RBP12.14□□□□□ -0.47
CCDC58-201ENST00000291458 PANK1Q8TE04 598 aa12.14□□□□□ -0.47
CCDC58-201ENST00000291458 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
CCDC58-201ENST00000291458 OTOFQ9HC10 1997 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 PNMA6EA0A0J9YXQ4 647 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 UBE2Q2LH0YL09 131 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 MYO1BO43795 1136 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 CIAO1O76071 339 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 FGFR2P21802 821 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 NF2P35240 595 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 IL15P40933 162 aaPredicted RBP12.13□□□□□ -0.47
CCDC58-201ENST00000291458 MAP2K1Q02750 393 aaPredicted RBP12.13□□□□□ -0.47
CCDC58-201ENST00000291458 TFCP2Q12800 502 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 SPRYD3Q8NCJ5 442 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 LPIN2Q92539 896 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 ZBED3Q96IU2 234 aaPredicted RBP12.13□□□□□ -0.47
CCDC58-201ENST00000291458 PRMT6Q96LA8 375 aaPredicted RBP12.13□□□□□ -0.47
CCDC58-201ENST00000291458 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
CCDC58-201ENST00000291458 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
CCDC58-201ENST00000291458 TCP10L2B9ZVM9 353 aa12.12□□□□□ -0.47
CCDC58-201ENST00000291458 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
CCDC58-201ENST00000291458 PHKA1P46020 1223 aa12.12□□□□□ -0.47
CCDC58-201ENST00000291458 CRKP46108 304 aa12.12□□□□□ -0.47
CCDC58-201ENST00000291458 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms