RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 DEFB132Q7Z7B7 95 aa9.1□□□□□ -0.95
EPHA4-201ENST00000281821 PNMA8AQ86V59 439 aaPredicted RBP9.1□□□□□ -0.95
EPHA4-201ENST00000281821 MAGEB6Q8N7X4 407 aa9.1□□□□□ -0.95
EPHA4-201ENST00000281821 RBM28Q9NW13 759 aaKnown RBP9.1□□□□□ -0.95
EPHA4-201ENST00000281821 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
EPHA4-201ENST00000281821 HSP90AA2PQ14568 343 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-201ENST00000281821 WTAPQ15007 396 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 TMOD4Q9NZQ9 345 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 MINPP1Q9UNW1 487 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 PARP4Q9UKK3 1724 aaKnown RBP9.09□□□□□ -0.95
EPHA4-201ENST00000281821 PRAMEF22A3QJZ6 481 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 PRPF40BQ6NWY9 871 aaKnown RBP9.09□□□□□ -0.95
EPHA4-201ENST00000281821 TM6SF1Q9BZW5 370 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 TSHZ2Q9NRE2 1034 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 LIMCH1Q9UPQ0 1083 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 CALML3P27482 149 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 EAF2Q96CJ1 260 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-201ENST00000281821 STRCQ7RTU9 1775 aa9.09□□□□□ -0.95
EPHA4-201ENST00000281821 CCDC96Q2M329 555 aa9.09□□□□□ -0.96
EPHA4-201ENST00000281821 BICD2Q8TD16 824 aa9.09□□□□□ -0.96
EPHA4-201ENST00000281821 SLC5A4Q9NY91 659 aa9.09□□□□□ -0.96
EPHA4-201ENST00000281821 COL16A1Q07092 1604 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-201ENST00000281821 MBD4O95243 580 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 ARMC9Q7Z3E5 817 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 CAMKK2Q96RR4 588 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 LMO7Q8WWI1 1683 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 LRRC37A3O60309 1634 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 USP14P54578 494 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 TMEM67Q5HYA8 995 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 RBM26Q5T8P6 1007 aaKnown RBP9.08□□□□□ -0.96
EPHA4-201ENST00000281821 ZNF594Q96JF6 807 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-201ENST00000281821 LMNB1P20700 586 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 CCDC73Q6ZRK6 1079 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 SYNE4Q8N205 404 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 GTPBP4Q9BZE4 634 aaKnown RBP9.08□□□□□ -0.96
EPHA4-201ENST00000281821 PDE6AP16499 860 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 CHMLP26374 656 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 FKBP1AP62942 108 aaKnown RBP9.08□□□□□ -0.96
EPHA4-201ENST00000281821 MCTP1Q6DN14 999 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 FDX1P10109 184 aa9.08□□□□□ -0.96
EPHA4-201ENST00000281821 IARSP41252 1262 aaKnown RBP9.08□□□□□ -0.96
EPHA4-201ENST00000281821 MRC1P22897 1456 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 C15orf52Q6ZUT6 534 aaKnown RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 CFAP45Q9UL16 551 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 MAP2P11137 1827 aaKnown RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 PATL2C9JE40 543 aaKnown RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 TAF5LO75529 589 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 NUP133Q8WUM0 1156 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 PSMD1Q99460 953 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 TBC1D2Q9BYX2 928 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 CD209Q9NNX6 404 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 GOLGA8AA7E2F4 631 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 GOLGA8BA8MQT2 603 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 K7ELQ4 463 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 PRKCSHP14314 528 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 TBC1D9Q6ZT07 1266 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 USP40Q9NVE5 1235 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 LRP6O75581 1613 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 MED23Q9ULK4 1368 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 IGHDP01880 384 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 SRGNP10124 158 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 DHX32Q7L7V1 743 aaKnown RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 FAM177A1Q8N128 213 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 TRIM44Q96DX7 344 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 PODXL2Q9NZ53 605 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 SGSM2O43147 1006 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 IREB2P48200 963 aaKnown RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 NMIQ13287 307 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 CHURC1Q8WUH1 139 aa9.07□□□□□ -0.96
EPHA4-201ENST00000281821 TNPO1Q92973 898 aaKnown RBP9.07□□□□□ -0.96
EPHA4-201ENST00000281821 MBD3O95983 291 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 RBM8AQ9Y5S9 174 aaKnown RBP9.06□□□□□ -0.96
EPHA4-201ENST00000281821 GPAA1O43292 621 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 PAXIP1Q6ZW49 1069 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-201ENST00000281821 PPP2R3BQ9Y5P8 575 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 STK24Q9Y6E0 443 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 COPB2P35606 906 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 KIAA2012Q0VF49 1180 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 HHIPL2Q6UWX4 724 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 TEX2Q8IWB9 1127 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 ANKRD20A12PQ8NF67 263 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 IQSEC3Q9UPP2 1182 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-201ENST00000281821 ZBTB43O43298 467 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 C21orf2O43822 256 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 CASTP20810 708 aaKnown RBP9.06□□□□□ -0.96
EPHA4-201ENST00000281821 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 BMP2KQ9NSY1 1161 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-201ENST00000281821 F8W031 263 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-201ENST00000281821 GNA11P29992 359 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 IFIT1BQ5T764 474 aaKnown RBP9.06□□□□□ -0.96
EPHA4-201ENST00000281821 STX8Q9UNK0 236 aa9.06□□□□□ -0.96
EPHA4-201ENST00000281821 hCG_1984214I3L0E3 225 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 POLRMTO00411 1230 aaKnown RBP9.05□□□□□ -0.96
EPHA4-201ENST00000281821 ENTPD3O75355 529 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 ZAP70P43403 619 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 LRRC24Q50LG9 513 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 ZNF713Q8N859 430 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-201ENST00000281821 RIPOR2Q9Y4F9 1068 aa9.05□□□□□ -0.96
EPHA4-201ENST00000281821 COL22A1Q8NFW1 1626 aaPredicted RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms