RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CUTAO60888 179 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 HMGB1P09429 215 aaKnown RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 CEBPAP49715 358 aaPredicted RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 LARP1BQ659C4 914 aaKnown RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 HDGFL2Q7Z4V5 671 aaPredicted RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 TXNDC2Q86VQ3 553 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 RIN2Q8WYP3 895 aaPredicted RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 IL25Q9H293 177 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 ZNF232Q9UNY5 417 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 PPP2R2CQ9Y2T4 447 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 DLC1Q96QB1 1528 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 FYB1O15117 783 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 MEFVO15553 781 aaPredicted RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 FAM228AQ86W67 206 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 KDM4CQ9H3R0 1056 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 ADGRB2O60241 1585 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 NRXN3Q9Y4C0 1643 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 KNDC1Q76NI1 1749 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 PPP1R12BO60237 982 aaPredicted RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 VAMP4O75379 141 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 ZNF202O95125 648 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 PDHBP11177 359 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 EZRP15311 586 aaKnown RBP10.53□□□□□ -0.72
PDGFC-201ENST00000274071 MAGEA8P43361 318 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 CCDC40Q4G0X9 1142 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 TTLL7Q6ZT98 887 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 ATP6V0A4Q9HBG4 840 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 ANAPC4Q9UJX5 808 aa10.53□□□□□ -0.72
PDGFC-201ENST00000274071 CD163L1Q9NR16 1453 aa10.52□□□□□ -0.72
PDGFC-201ENST00000274071 ATXN2Q99700 1313 aaKnown RBP10.52□□□□□ -0.72
PDGFC-201ENST00000274071 TMEM2Q9UHN6 1383 aa10.52□□□□□ -0.72
PDGFC-201ENST00000274071 RTN3O95197 1032 aaPredicted RBP10.52□□□□□ -0.73
PDGFC-201ENST00000274071 RHOXF2BP0C7M4 288 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 NEFHP12036 1026 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 ABCD1P33897 745 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 NUTM2GQ5VZR2 741 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 OR8K1Q8NGG5 319 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 RHOXF2Q9BQY4 288 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 SUDS3Q9H7L9 328 aaPredicted RBP10.52□□□□□ -0.73
PDGFC-201ENST00000274071 HOMER3Q9NSC5 361 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 ANO10Q9NW15 660 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 G3BP2Q9UN86 482 aaKnown RBP10.52□□□□□ -0.73
PDGFC-201ENST00000274071 PCDHGA4Q9Y5G9 962 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 SSH2Q76I76 1423 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 KIAA0754O94854 1291 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 CPA1P15085 419 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 GBP2P32456 591 aaPredicted RBP10.52□□□□□ -0.73
PDGFC-201ENST00000274071 KIAA1328Q86T90 577 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 TMX4Q9H1E5 349 aaPredicted RBP10.52□□□□□ -0.73
PDGFC-201ENST00000274071 HYPKQ9NX55 129 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 TPCN1Q9ULQ1 816 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 SNX14Q9Y5W7 946 aa10.52□□□□□ -0.73
PDGFC-201ENST00000274071 EIF3HO15372 352 aaKnown RBP eCLIP10.51□□□□□ -0.73
PDGFC-201ENST00000274071 E2F5Q15329 346 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 RPAP2Q8IXW5 612 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-201ENST00000274071 CEP57L1Q8IYX8 460 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 RASEFQ8IZ41 740 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 VIPAS39Q9H9C1 493 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.51□□□□□ -0.73
PDGFC-201ENST00000274071 GRIN2DO15399 1336 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 ST3GAL1Q11201 340 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 USP4Q13107 963 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.51□□□□□ -0.73
PDGFC-201ENST00000274071 NCAPG2Q86XI2 1143 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 GBP3Q9H0R5 595 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 RTEL1Q9NZ71 1219 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 UBR1Q8IWV7 1749 aa10.51□□□□□ -0.73
PDGFC-201ENST00000274071 PDIA5Q14554 519 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 SNCBQ16143 134 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 HHATQ5VTY9 493 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 B4GALNT4Q76KP1 1039 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 ARMCX6Q7L4S7 300 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 FCHSD1Q86WN1 690 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 TSPYL6Q8N831 410 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 FAM76AQ8TAV0 307 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 MAGEC3Q8TD91 643 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 CCDC12Q8WUD4 166 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-201ENST00000274071 CAPS2Q9BXY5 557 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 SLC40A1Q9NP59 571 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 WASLO00401 505 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-201ENST00000274071 ARHGAP25P42331 645 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 GOLGA8FQ08AF8 430 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 GOLGA8DPQ0D2H9 430 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 EZH1Q92800 747 aaPredicted RBP10.5□□□□□ -0.73
PDGFC-201ENST00000274071 VCPKMTQ9H867 229 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 PICK1Q9NRD5 415 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 MIS18AQ9NYP9 233 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 ZC3H4Q9UPT8 1303 aaKnown RBP10.5□□□□□ -0.73
PDGFC-201ENST00000274071 ADCY9O60503 1353 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 ATP10DQ9P241 1426 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 ZEB2O60315 1214 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 CDR1P51861 262 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 KIF4BQ2VIQ3 1234 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 PARP9Q8IXQ6 854 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 TCP11Q8WWU5 503 aa10.5□□□□□ -0.73
PDGFC-201ENST00000274071 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms