RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 PPP1R9AQ9ULJ8 1098 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 GSTA1P08263 222 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 GSTA2P09210 222 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 SH3BGRP55822 239 aaPredicted RBP17.64■□□□□ 0.41
UBR3-201ENST00000272793 KARSQ15046 597 aaKnown RBP17.64■□□□□ 0.41
UBR3-201ENST00000272793 GJC2Q5T442 439 aaPredicted RBP17.64■□□□□ 0.41
UBR3-201ENST00000272793 CCDC68Q9H2F9 335 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 MRFAP1Q9Y605 127 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 SLC12A2P55011 1212 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 CCDC93Q567U6 631 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 ACBD5Q5T8D3 534 aaPredicted RBP17.64■□□□□ 0.41
UBR3-201ENST00000272793 USP6NLQ92738 828 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 DAAM1Q9Y4D1 1078 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 PYGLP06737 847 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 RPAINQ86UA6 219 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 RNF217Q8TC41 542 aa17.64■□□□□ 0.41
UBR3-201ENST00000272793 SLC8A3P57103 927 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 RASIP1Q5U651 963 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 RRAGBQ5VZM2 374 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 KAT14Q9H8E8 782 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 OCM2P0CE71 109 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 OCMP0CE72 109 aaPredicted RBP17.63■□□□□ 0.41
UBR3-201ENST00000272793 KRT83P78385 493 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 LZTFL1Q9NQ48 299 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 DDX19AQ9NUU7 478 aaKnown RBP17.63■□□□□ 0.41
UBR3-201ENST00000272793 LMNAP02545 664 aaKnown RBP17.63■□□□□ 0.41
UBR3-201ENST00000272793 SYKP43405 635 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 MMEL1Q495T6 779 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 MAP3K21Q5TCX8 1036 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 SPATS2LQ9NUQ6 558 aaKnown RBP17.63■□□□□ 0.41
UBR3-201ENST00000272793 BAIAP2L1Q9UHR4 511 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 UBXN1Q04323 297 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 FOXD4Q12950 439 aaPredicted RBP17.63■□□□□ 0.41
UBR3-201ENST00000272793 HHATQ5VTY9 493 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 RPGRQ92834 1020 aaKnown RBP17.63■□□□□ 0.41
UBR3-201ENST00000272793 SATB2Q9UPW6 733 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 ZBTB24O43167 697 aaPredicted RBP17.63■□□□□ 0.41
UBR3-201ENST00000272793 TBC1D8O95759 1140 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 MAP3K12Q12852 859 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 ZNF569Q5MCW4 686 aa17.63■□□□□ 0.41
UBR3-201ENST00000272793 TMEM67Q5HYA8 995 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 NSMCE1Q8WV22 266 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 FAN1Q9Y2M0 1017 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 NOP14P78316 857 aaKnown RBP17.62■□□□□ 0.41
UBR3-201ENST00000272793 JADE1Q6IE81 842 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 MCM5P33992 734 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 DCAF17Q5H9S7 520 aaPredicted RBP17.62■□□□□ 0.41
UBR3-201ENST00000272793 DCLK2Q8N568 766 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 POMGNT1Q8WZA1 660 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 ZSCAN16Q9H4T2 348 aaPredicted RBP17.62■□□□□ 0.41
UBR3-201ENST00000272793 ZBTB21Q9ULJ3 1066 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 MAN1A2O60476 641 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 TRIM56Q9BRZ2 755 aaKnown RBP17.62■□□□□ 0.41
UBR3-201ENST00000272793 CCDC94Q9BW85 323 aaPredicted RBP17.62■□□□□ 0.41
UBR3-201ENST00000272793 CTTNBP2NLQ9P2B4 639 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 RINLQ6ZS11 566 aa17.62■□□□□ 0.41
UBR3-201ENST00000272793 SYT1P21579 422 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 RPGRIP1Q96KN7 1286 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 CCDC186Q7Z3E2 898 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 SPG7Q9UQ90 795 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 TSPY2A6NKD2 308 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 PAWRQ96IZ0 340 aaKnown RBP17.61■□□□□ 0.41
UBR3-201ENST00000272793 STX10O60499 249 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 CCDC159P0C7I6 412 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 TSTA3Q13630 321 aaPredicted RBP17.61■□□□□ 0.41
UBR3-201ENST00000272793 CCDC138Q96M89 665 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 SLC26A6Q9BXS9 759 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 TNNC1P63316 161 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 HSP90AA5PQ58FG0 334 aa17.61■□□□□ 0.41
UBR3-201ENST00000272793 EEF1DP29692 281 aaKnown RBP17.61■□□□□ 0.41
UBR3-201ENST00000272793 SPDYE2BA6NHP3 402 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 SPDYE6P0CI01 402 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 GFAPP14136 432 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 PMS1P54277 932 aaKnown RBP17.6■□□□□ 0.41
UBR3-201ENST00000272793 TUBB4BP68371 445 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 NAP1L4Q99733 375 aaKnown RBP17.6■□□□□ 0.41
UBR3-201ENST00000272793 CCDC42Q96M95 316 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 MX1P20591 662 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 EEF1B2P24534 225 aaKnown RBP17.6■□□□□ 0.41
UBR3-201ENST00000272793 ANKRD20A3Q5VUR7 823 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 HIP1RO75146 1068 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 DUSP27Q5VZP5 1158 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 RBSNQ9H1K0 784 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 THEGQ9P2T0 379 aa17.6■□□□□ 0.41
UBR3-201ENST00000272793 GIGYF1O75420 1035 aaPredicted RBP17.59■□□□□ 0.41
UBR3-201ENST00000272793 LRGUKQ96M69 825 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
UBR3-201ENST00000272793 GNGT2O14610 69 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 UBE2HP62256 183 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 CCDC124Q96CT7 223 aaKnown RBP17.59■□□□□ 0.41
UBR3-201ENST00000272793 GOLGA6CA6NDK9 693 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 GOLGA6DP0CG33 693 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 MICU3Q86XE3 530 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 KIFAP3Q92845 792 aa17.59■□□□□ 0.41
UBR3-201ENST00000272793 POLR3CQ9BUI4 534 aaPredicted RBP17.59■□□□□ 0.41
UBR3-201ENST00000272793 RNF41Q9H4P4 317 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms