RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 NSUN4Q96CB9 384 aaKnown RBP17.35■□□□□ 0.37
SSBP1-201ENST00000265304 SERPINA10Q9UK55 444 aa17.35■□□□□ 0.37
SSBP1-201ENST00000265304 MAST3O60307 1309 aa17.35■□□□□ 0.37
SSBP1-201ENST00000265304 GAKO14976 1311 aa17.34■□□□□ 0.37
SSBP1-201ENST00000265304 TTC22Q5TAA0 569 aa17.34■□□□□ 0.37
SSBP1-201ENST00000265304 ERICH6Q7L0X2 663 aa17.34■□□□□ 0.37
SSBP1-201ENST00000265304 EVI5LQ96CN4 794 aa17.34■□□□□ 0.37
SSBP1-201ENST00000265304 CNOT7Q9UIV1 285 aaKnown RBP17.34■□□□□ 0.37
SSBP1-201ENST00000265304 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
SSBP1-201ENST00000265304 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.36
SSBP1-201ENST00000265304 GOLIM4O00461 696 aa17.33■□□□□ 0.36
SSBP1-201ENST00000265304 EDC3Q96F86 508 aaKnown RBP17.33■□□□□ 0.36
SSBP1-201ENST00000265304 TTF2Q9UNY4 1162 aaKnown RBP17.33■□□□□ 0.36
SSBP1-201ENST00000265304 JAG2Q9Y219 1238 aa17.33■□□□□ 0.36
SSBP1-201ENST00000265304 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
SSBP1-201ENST00000265304 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
SSBP1-201ENST00000265304 TCRBV5S4A2TA0A5A2 114 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 GSPT1P15170 499 aaKnown RBP17.32■□□□□ 0.36
SSBP1-201ENST00000265304 MECOMQ03112 1051 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 MAP3K12Q12852 859 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 BMP2KLQ5H9B9 411 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 KIAA0825Q8IV33 1275 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 OGFOD1Q8N543 542 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 ZDHHC15Q96MV8 337 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 DNAJC2Q99543 621 aaKnown RBP17.32■□□□□ 0.36
SSBP1-201ENST00000265304 LRP2BPQ9P2M1 347 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 PGAP2Q9UHJ9 254 aa17.32■□□□□ 0.36
SSBP1-201ENST00000265304 CDK5RAP2Q96SN8 1893 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 IQCA1LA6NCM1 817 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 H7C1D1 291 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 EPS15P42566 896 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 PPP4CP60510 307 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 UBE3CQ15386 1083 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 SLF2Q8IX21 1173 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 MICALL2Q8IY33 904 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 ADARB2Q9NS39 739 aaKnown RBP17.31■□□□□ 0.36
SSBP1-201ENST00000265304 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 HDAC9Q9UKV0 1011 aa17.31■□□□□ 0.36
SSBP1-201ENST00000265304 GPR75-ASB3A0A0A6YYF3 556 aa17.3■□□□□ 0.36
SSBP1-201ENST00000265304 MAP4K4O95819 1239 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-201ENST00000265304 LDHCP07864 332 aa17.3■□□□□ 0.36
SSBP1-201ENST00000265304 ZFYP08048 801 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-201ENST00000265304 VEGFAP15692 232 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-201ENST00000265304 ADD2P35612 726 aa17.3■□□□□ 0.36
SSBP1-201ENST00000265304 GSTO1P78417 241 aa17.3■□□□□ 0.36
SSBP1-201ENST00000265304 APOBEC3HQ6NTF7 200 aaKnown RBP17.3■□□□□ 0.36
SSBP1-201ENST00000265304 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
SSBP1-201ENST00000265304 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-201ENST00000265304 BCL11AQ9H165 835 aa17.3■□□□□ 0.36
SSBP1-201ENST00000265304 TAF1DQ9H5J8 278 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-201ENST00000265304 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
SSBP1-201ENST00000265304 FOCADQ5VW36 1801 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 SHTN1A0MZ66 631 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 PDE6AP16499 860 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 SDSP20132 328 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 CRKP46108 304 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 LRRFIP1Q32MZ4 808 aaKnown RBP17.29■□□□□ 0.36
SSBP1-201ENST00000265304 ZSCAN25Q6NSZ9 544 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 SKAP1Q86WV1 359 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
SSBP1-201ENST00000265304 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 TEKT1Q969V4 418 aa17.29■□□□□ 0.36
SSBP1-201ENST00000265304 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.29■□□□□ 0.367e-14■□□□□ 9.4
SSBP1-201ENST00000265304 MROH7-TTC4A0A0A0MT08 1334 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 IDH1O75874 414 aaKnown RBP17.28■□□□□ 0.36
SSBP1-201ENST00000265304 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
SSBP1-201ENST00000265304 EPHX2P34913 555 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 HIRAP54198 1017 aaPredicted RBP17.28■□□□□ 0.36
SSBP1-201ENST00000265304 SLC9C2Q5TAH2 1124 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 FKBP1CQ5VVH2 108 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 RAI14Q9P0K7 980 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 DAGLAQ9Y4D2 1042 aa17.28■□□□□ 0.36
SSBP1-201ENST00000265304 WNT10BO00744 389 aa17.27■□□□□ 0.36
SSBP1-201ENST00000265304 RNF113AO15541 343 aaKnown RBP17.27■□□□□ 0.36
SSBP1-201ENST00000265304 NPM3O75607 178 aaKnown RBP17.27■□□□□ 0.36
SSBP1-201ENST00000265304 DIXDC1Q155Q3 683 aa17.27■□□□□ 0.36
SSBP1-201ENST00000265304 CFAP100Q494V2 611 aa17.27■□□□□ 0.36
SSBP1-201ENST00000265304 NAA16Q6N069 864 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-201ENST00000265304 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-201ENST00000265304 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.36
SSBP1-201ENST00000265304 CERS3Q8IU89 383 aa17.27■□□□□ 0.36
SSBP1-201ENST00000265304 PRMT6Q96LA8 375 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-201ENST00000265304 EGFRP00533 1210 aa17.26■□□□□ 0.35
SSBP1-201ENST00000265304 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
SSBP1-201ENST00000265304 SAMD7Q7Z3H4 446 aa17.26■□□□□ 0.35
SSBP1-201ENST00000265304 ADGRA1Q86SQ6 560 aa17.26■□□□□ 0.35
SSBP1-201ENST00000265304 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
SSBP1-201ENST00000265304 RRAGCQ9HB90 399 aa17.26■□□□□ 0.35
SSBP1-201ENST00000265304 F8W031 263 aaPredicted RBP17.25■□□□□ 0.35
SSBP1-201ENST00000265304 RGS3P49796 1198 aa17.25■□□□□ 0.35
SSBP1-201ENST00000265304 RHBDL3P58872 404 aa17.25■□□□□ 0.35
SSBP1-201ENST00000265304 DLGAP5Q15398 846 aa17.25■□□□□ 0.35
SSBP1-201ENST00000265304 TRPM4Q8TD43 1214 aa17.25■□□□□ 0.35
SSBP1-201ENST00000265304 APPBP2Q92624 585 aa17.25■□□□□ 0.35
SSBP1-201ENST00000265304 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
SSBP1-201ENST00000265304 NMRK2Q9NPI5 230 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms