RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 USP17L3A6NCW0 530 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 USP17L4A6NCW7 530 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 GPSM2P81274 684 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 TNFAIP1Q13829 316 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 CCDC129Q6ZRS4 1044 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 USP17L1Q7RTZ2 530 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 LIMCH1Q9UPQ0 1083 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 RAD17O75943 681 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 DPEP1P16444 411 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 KIF5BP33176 963 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 SCNN1DP51172 638 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 WTAPQ15007 396 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 UBE3CQ15386 1083 aa9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 TRPM3Q9HCF6 1732 aaPredicted RBP9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 PARP4Q9UKK3 1724 aaKnown RBP9.71□□□□□ -0.85
GTF3C3-201ENST00000263956 LMO7Q8WWI1 1683 aa9.71□□□□□ -0.86
GTF3C3-201ENST00000263956 GOLGA8AA7E2F4 631 aa9.71□□□□□ -0.86
GTF3C3-201ENST00000263956 GOLGA8BA8MQT2 603 aa9.71□□□□□ -0.86
GTF3C3-201ENST00000263956 CREB3L3Q68CJ9 461 aa9.71□□□□□ -0.86
GTF3C3-201ENST00000263956 GPR101Q96P66 508 aaPredicted RBP9.71□□□□□ -0.86
GTF3C3-201ENST00000263956 SAP30BPQ9UHR5 308 aaKnown RBP9.71□□□□□ -0.86
GTF3C3-201ENST00000263956 FAM208AQ9UK61 1670 aaKnown RBP9.71□□□□□ -0.86
GTF3C3-201ENST00000263956 CD209Q9NNX6 404 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 SEC63Q9UGP8 760 aaKnown RBP9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 RGS12O14924 1447 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 SNAP23O00161 211 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 TBC1D32Q96NH3 1257 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 POLRMTO00411 1230 aaKnown RBP9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 PDIA4P13667 645 aaKnown RBP9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 TGFB2P61812 414 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 RASGRF1Q13972 1273 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 LARP1BQ659C4 914 aaKnown RBP9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 MAPKAPK5Q8IW41 473 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 TGFBRAP1Q8WUH2 860 aa9.7□□□□□ -0.86
GTF3C3-201ENST00000263956 ATG9AQ7Z3C6 839 aa9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 PIBF1Q8WXW3 757 aa9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 PATL2C9JE40 543 aaKnown RBP9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 BTDP43251 543 aa9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 EAPPQ56P03 285 aaPredicted RBP9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 IFIT1BQ5T764 474 aaKnown RBP9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 CCDC83Q8IWF9 413 aa9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 PRC1O43663 620 aa9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 TCP10Q12799 353 aa9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 C8orf34Q49A92 452 aa9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 ZNF277Q9NRM2 450 aaPredicted RBP9.69□□□□□ -0.86
GTF3C3-201ENST00000263956 ATP2B1P20020 1258 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 AOC3Q16853 763 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 TBC1D16Q8TBP0 767 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 BRF1Q92994 677 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 CAMKK2Q96RR4 588 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 DSCC1Q9BVC3 393 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 GRIN3BO60391 1043 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 PI16Q6UXB8 463 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 USP26Q9BXU7 913 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 MYO3BQ8WXR4 1341 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 DDX11L8A8MPP1 907 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 ECE2O60344 883 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 GNAQP50148 359 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 DDR1Q08345 913 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 MICU3Q86XE3 530 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 DDX11Q96FC9 970 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 ANTXR1Q9H6X2 564 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 MRC1P22897 1456 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 KLF18A0A0U1RQI7 1052 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 METAP2P50579 478 aaKnown RBP eCLIP9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 TMED8Q6PL24 325 aaPredicted RBP9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 ARPP21Q9UBL0 812 aaPredicted RBP9.68□□□□□ -0.86
GTF3C3-201ENST00000263956 ZBTB43O43298 467 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 EPB41L2O43491 1005 aaKnown RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 SRGNP10124 158 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 RFX5P48382 616 aaPredicted RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 FAM84BQ96KN1 310 aaPredicted RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 RNF181Q9P0P0 153 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 PNPLA7Q6ZV29 1317 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 A0A0D9SFI3 127 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 MCAMP43121 646 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 CCT2P78371 535 aaKnown RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 ZMYM1Q5SVZ6 1142 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 TICAM2Q86XR7 235 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 DCPSQ96C86 337 aaKnown RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 ZNF396Q96N95 335 aaPredicted RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 SH2D4AQ9H788 454 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 WDR33Q9C0J8 1336 aaKnown RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 ADD2P35612 726 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 SSRP1Q08945 709 aaKnown RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 SULF1Q8IWU6 871 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 TCEANC2Q96MN5 208 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 LRRC2Q9BYS8 371 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 PICK1Q9NRD5 415 aa9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 NOL7Q9UMY1 257 aaKnown RBP9.67□□□□□ -0.86
GTF3C3-201ENST00000263956 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 USP17L21D6R901 530 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
GTF3C3-201ENST00000263956 IARSP41252 1262 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms