RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 IFNL2Q8IZJ0 200 aa20.81■□□□□ 0.92
TRAF4-201ENST00000262395 UTP14AQ9BVJ6 771 aaKnown RBP20.81■□□□□ 0.92
TRAF4-201ENST00000262395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.81■□□□□ 0.925e-8■■■■□ 23.6
TRAF4-201ENST00000262395 SIPA1L3O60292 1781 aaPredicted RBP20.8■□□□□ 0.92
TRAF4-201ENST00000262395 RGPD5Q99666 1765 aa20.8■□□□□ 0.92
TRAF4-201ENST00000262395 VGLL3A8MV65 326 aa20.8■□□□□ 0.92
TRAF4-201ENST00000262395 TMEM232C9JQI7 657 aa20.8■□□□□ 0.92
TRAF4-201ENST00000262395 ANTXR2P58335 489 aa20.8■□□□□ 0.92
TRAF4-201ENST00000262395 TPM4P67936 248 aa20.8■□□□□ 0.92
TRAF4-201ENST00000262395 PUS7LQ9H0K6 701 aaKnown RBP20.8■□□□□ 0.92
TRAF4-201ENST00000262395 POLR3EQ9NVU0 708 aa20.8■□□□□ 0.92
TRAF4-201ENST00000262395 IMMTQ16891 758 aaKnown RBP20.8■□□□□ 0.92
TRAF4-201ENST00000262395 CFAP100Q494V2 611 aa20.8■□□□□ 0.92
TRAF4-201ENST00000262395 EYA2O00167 538 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 URI1O94763 535 aaPredicted RBP20.79■□□□□ 0.92
TRAF4-201ENST00000262395 IL15P40933 162 aaPredicted RBP20.79■□□□□ 0.92
TRAF4-201ENST00000262395 UBASH3AP57075 661 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 HSD3B7Q9H2F3 369 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 H7C1W4 665 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 KIF23Q02241 960 aaPredicted RBP20.79■□□□□ 0.92
TRAF4-201ENST00000262395 SPECC1Q5M775 1068 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 PHKBQ93100 1093 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 ZBTB9Q96C00 473 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 L2HGDHQ9H9P8 463 aa20.79■□□□□ 0.92
TRAF4-201ENST00000262395 UBE2Q2LH0YL09 131 aa20.78■□□□□ 0.92
TRAF4-201ENST00000262395 KIF2AO00139 706 aaPredicted RBP20.78■□□□□ 0.92
TRAF4-201ENST00000262395 FANCGO15287 622 aa20.78■□□□□ 0.92
TRAF4-201ENST00000262395 YEATS4O95619 227 aa20.78■□□□□ 0.92
TRAF4-201ENST00000262395 TTC39AQ5SRH9 613 aa20.78■□□□□ 0.92
TRAF4-201ENST00000262395 RALYLQ86SE5 291 aaKnown RBP20.78■□□□□ 0.92
TRAF4-201ENST00000262395 ANKLE2Q86XL3 938 aa20.78■□□□□ 0.92
TRAF4-201ENST00000262395 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
TRAF4-201ENST00000262395 SYKP43405 635 aa20.78■□□□□ 0.92
TRAF4-201ENST00000262395 GNL2Q13823 731 aaKnown RBP20.78■□□□□ 0.92
TRAF4-201ENST00000262395 DNAJC5Q9H3Z4 198 aa20.78■□□□□ 0.92
TRAF4-201ENST00000262395 PSDA5PKW4 1024 aaPredicted RBP20.77■□□□□ 0.92
TRAF4-201ENST00000262395 ZAP70P43403 619 aa20.77■□□□□ 0.92
TRAF4-201ENST00000262395 CCDC93Q567U6 631 aa20.77■□□□□ 0.92
TRAF4-201ENST00000262395 SENP2Q9HC62 589 aa20.77■□□□□ 0.92
TRAF4-201ENST00000262395 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
TRAF4-201ENST00000262395 MEGF6O75095 1541 aa20.77■□□□□ 0.92
TRAF4-201ENST00000262395 SEC31AO94979 1220 aaKnown RBP20.77■□□□□ 0.91
TRAF4-201ENST00000262395 H2AFXP16104 143 aaPredicted RBP20.77■□□□□ 0.91
TRAF4-201ENST00000262395 ABCC6O95255 1503 aa20.77■□□□□ 0.91
TRAF4-201ENST00000262395 NRDCO43847 1150 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 ETF1P62495 437 aaKnown RBP20.76■□□□□ 0.91
TRAF4-201ENST00000262395 MB21D2Q8IYB1 491 aaPredicted RBP20.76■□□□□ 0.91
TRAF4-201ENST00000262395 CARD6Q9BX69 1037 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 KCND1Q9NSA2 647 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 FHOD1Q9Y613 1164 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 FOXN1O15353 648 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 CMA1P23946 247 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 BPIFA3Q9BQP9 254 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 ALG1Q9BT22 464 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 MYL10Q9BUA6 226 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 FANCLQ9NW38 375 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 TMEM51Q9NW97 253 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 FAM53CQ9NYF3 392 aa20.76■□□□□ 0.91
TRAF4-201ENST00000262395 POLR3GO15318 223 aaPredicted RBP20.75■□□□□ 0.91
TRAF4-201ENST00000262395 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
TRAF4-201ENST00000262395 MAPK8IP2Q13387 824 aaPredicted RBP20.75■□□□□ 0.91
TRAF4-201ENST00000262395 SHC4Q6S5L8 630 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 PDILTQ8N807 584 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 XAGE2Q96GT9 111 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 ZNF213O14771 459 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 BRAPQ7Z569 592 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 MNS1Q8NEH6 495 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 NCOA7Q8NI08 942 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 UBXN4Q92575 508 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 INCENPQ9NQS7 918 aa20.75■□□□□ 0.91
TRAF4-201ENST00000262395 BMS1Q14692 1282 aaKnown RBP20.74■□□□□ 0.91
TRAF4-201ENST00000262395 CCDC158Q5M9N0 1113 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 MICU3Q86XE3 530 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 VPS37DQ86XT2 251 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 DCAF5Q96JK2 942 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 NOL10Q9BSC4 688 aaKnown RBP20.74■□□□□ 0.91
TRAF4-201ENST00000262395 APPP05067 770 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 TRERF1Q96PN7 1200 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 PNMA6AP0CW24 399 aaPredicted RBP20.74■□□□□ 0.91
TRAF4-201ENST00000262395 SLC39A14Q15043 492 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 TRIM65Q6PJ69 517 aa20.74■□□□□ 0.91
TRAF4-201ENST00000262395 EVCP57679 992 aa20.73■□□□□ 0.91
TRAF4-201ENST00000262395 GPAA1O43292 621 aa20.73■□□□□ 0.91
TRAF4-201ENST00000262395 CDC27P30260 824 aa20.73■□□□□ 0.91
TRAF4-201ENST00000262395 LONRF3Q496Y0 759 aa20.73■□□□□ 0.91
TRAF4-201ENST00000262395 KRT40Q6A162 431 aa20.73■□□□□ 0.91
TRAF4-201ENST00000262395 FOXP4Q8IVH2 680 aaPredicted RBP20.73■□□□□ 0.91
TRAF4-201ENST00000262395 TOP1P11387 765 aaKnown RBP20.72■□□□□ 0.91
TRAF4-201ENST00000262395 MYL5Q02045 173 aa20.72■□□□□ 0.91
TRAF4-201ENST00000262395 PDE4BQ07343 736 aa20.72■□□□□ 0.91
TRAF4-201ENST00000262395 PLA2G4AP47712 749 aa20.72■□□□□ 0.91
TRAF4-201ENST00000262395 CYB5R4Q7L1T6 521 aa20.72■□□□□ 0.91
TRAF4-201ENST00000262395 GPR108Q9NPR9 543 aa20.72■□□□□ 0.91
TRAF4-201ENST00000262395 ARFGEF2Q9Y6D5 1785 aa20.72■□□□□ 0.91
TRAF4-201ENST00000262395 CCDC57Q2TAC2 916 aa20.71■□□□□ 0.91
TRAF4-201ENST00000262395 CDK11BP21127 795 aaKnown RBP20.71■□□□□ 0.91
TRAF4-201ENST00000262395 ZNF827Q17R98 1081 aa20.71■□□□□ 0.91
TRAF4-201ENST00000262395 REXO1L1PQ8IX06 675 aa20.71■□□□□ 0.91
TRAF4-201ENST00000262395 METAP2P50579 478 aaKnown RBP eCLIP20.71■□□□□ 0.91
TRAF4-201ENST00000262395 ADKP55263 362 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms