RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 GNL2Q13823 731 aaKnown RBP20.2■□□□□ 0.82
TRAM1-201ENST00000262213 PI16Q6UXB8 463 aa20.2■□□□□ 0.82
TRAM1-201ENST00000262213 UTP14AQ9BVJ6 771 aaKnown RBP20.2■□□□□ 0.82
TRAM1-201ENST00000262213 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
TRAM1-201ENST00000262213 EYA2O00167 538 aa20.19■□□□□ 0.82
TRAM1-201ENST00000262213 SYKP43405 635 aa20.19■□□□□ 0.82
TRAM1-201ENST00000262213 TTC39AQ5SRH9 613 aa20.19■□□□□ 0.82
TRAM1-201ENST00000262213 AXDND1Q5T1B0 1012 aaPredicted RBP20.19■□□□□ 0.82
TRAM1-201ENST00000262213 PODXL2Q9NZ53 605 aa20.19■□□□□ 0.82
TRAM1-201ENST00000262213 ABCC6O95255 1503 aa20.19■□□□□ 0.82
TRAM1-201ENST00000262213 KIF23Q02241 960 aaPredicted RBP20.19■□□□□ 0.82
TRAM1-201ENST00000262213 BPIFA3Q9BQP9 254 aa20.19■□□□□ 0.82
TRAM1-201ENST00000262213 KCND1Q9NSA2 647 aa20.19■□□□□ 0.82
TRAM1-201ENST00000262213 CWC25Q9NXE8 425 aaPredicted RBP20.19■□□□□ 0.82
TRAM1-201ENST00000262213 TMEM232C9JQI7 657 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 ZBTB22O15209 634 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 DHX16O60231 1041 aaKnown RBP20.18■□□□□ 0.82
TRAM1-201ENST00000262213 ANTXR2P58335 489 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 BMS1Q14692 1282 aaKnown RBP20.18■□□□□ 0.82
TRAM1-201ENST00000262213 MNS1Q8NEH6 495 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 CLIC6Q96NY7 704 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 EPC1Q9H2F5 836 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 NBPF26B4DH59 902 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 H7C1W4 665 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 FOXP2O15409 715 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 CYP27B1O15528 508 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 CHRNA2Q15822 529 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 NBPF14Q5TI25 921 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 NBPF10Q6P3W6 841 aaKnown RBP20.18■□□□□ 0.82
TRAM1-201ENST00000262213 NBPF15Q8N660 670 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 UBXN4Q92575 508 aa20.18■□□□□ 0.82
TRAM1-201ENST00000262213 H2AFXP16104 143 aaPredicted RBP20.17■□□□□ 0.82
TRAM1-201ENST00000262213 ETF1P62495 437 aaKnown RBP20.17■□□□□ 0.82
TRAM1-201ENST00000262213 SCARF1Q14162 830 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 CCDC93Q567U6 631 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 BRAPQ7Z569 592 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 STK11IPQ8N1F8 1099 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 DDX17Q92841 729 aaKnown RBP20.17■□□□□ 0.82
TRAM1-201ENST00000262213 PUS7LQ9H0K6 701 aaKnown RBP20.17■□□□□ 0.82
TRAM1-201ENST00000262213 CMA1P23946 247 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 CABLES1Q8TDN4 633 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 NOL10Q9BSC4 688 aaKnown RBP20.17■□□□□ 0.82
TRAM1-201ENST00000262213 HSD3B7Q9H2F3 369 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 A1BGP04217 495 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 PHKBQ93100 1093 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 CHMP4CQ96CF2 233 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 CARD6Q9BX69 1037 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 FAM53CQ9NYF3 392 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 FHOD1Q9Y613 1164 aa20.17■□□□□ 0.82
TRAM1-201ENST00000262213 MB21D2Q8IYB1 491 aaPredicted RBP20.16■□□□□ 0.82
TRAM1-201ENST00000262213 PDILTQ8N807 584 aa20.16■□□□□ 0.82
TRAM1-201ENST00000262213 NCOA7Q8NI08 942 aa20.16■□□□□ 0.82
TRAM1-201ENST00000262213 ALG1Q9BT22 464 aa20.16■□□□□ 0.82
TRAM1-201ENST00000262213 POLR3GO15318 223 aaPredicted RBP20.16■□□□□ 0.82
TRAM1-201ENST00000262213 SEC31AO94979 1220 aaKnown RBP20.16■□□□□ 0.82
TRAM1-201ENST00000262213 SPECC1Q5M775 1068 aa20.16■□□□□ 0.82
TRAM1-201ENST00000262213 CCDC158Q5M9N0 1113 aa20.16■□□□□ 0.82
TRAM1-201ENST00000262213 MEGF6O75095 1541 aa20.16■□□□□ 0.82
TRAM1-201ENST00000262213 ZNF213O14771 459 aa20.15■□□□□ 0.82
TRAM1-201ENST00000262213 ZAP70P43403 619 aa20.15■□□□□ 0.82
TRAM1-201ENST00000262213 NKX2-3Q8TAU0 364 aa20.15■□□□□ 0.82
TRAM1-201ENST00000262213 FANCLQ9NW38 375 aa20.15■□□□□ 0.82
TRAM1-201ENST00000262213 ARFGEF2Q9Y6D5 1785 aa20.15■□□□□ 0.82
TRAM1-201ENST00000262213 FANCGO15287 622 aa20.15■□□□□ 0.82
TRAM1-201ENST00000262213 PNMA6AP0CW24 399 aaPredicted RBP20.15■□□□□ 0.82
TRAM1-201ENST00000262213 TOP1P11387 765 aaKnown RBP20.15■□□□□ 0.82
TRAM1-201ENST00000262213 DCAF5Q96JK2 942 aa20.15■□□□□ 0.82
TRAM1-201ENST00000262213 MYL5Q02045 173 aa20.14■□□□□ 0.82
TRAM1-201ENST00000262213 SLC39A14Q15043 492 aa20.14■□□□□ 0.82
TRAM1-201ENST00000262213 SHC4Q6S5L8 630 aa20.14■□□□□ 0.82
TRAM1-201ENST00000262213 VPS37DQ86XT2 251 aa20.14■□□□□ 0.82
TRAM1-201ENST00000262213 XAGE2Q96GT9 111 aa20.14■□□□□ 0.82
TRAM1-201ENST00000262213 PHRF1Q9P1Y6 1649 aaKnown RBP20.14■□□□□ 0.81
TRAM1-201ENST00000262213 APPP05067 770 aa20.14■□□□□ 0.81
TRAM1-201ENST00000262213 EVCP57679 992 aa20.14■□□□□ 0.81
TRAM1-201ENST00000262213 MICU3Q86XE3 530 aa20.14■□□□□ 0.81
TRAM1-201ENST00000262213 GPR108Q9NPR9 543 aa20.14■□□□□ 0.81
TRAM1-201ENST00000262213 TMCO3Q6UWJ1 677 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 SCN11AQ9UI33 1791 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 UBE2Q2LH0YL09 131 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 FOXN1O15353 648 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 KRT40Q6A162 431 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 TRIM65Q6PJ69 517 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 TRERF1Q96PN7 1200 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 MYL10Q9BUA6 226 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 SENP2Q9HC62 589 aa20.13■□□□□ 0.81
TRAM1-201ENST00000262213 IKBKBO14920 756 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 GPAA1O43292 621 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 OLFM4Q6UX06 510 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 CCDC66A2RUB6 948 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 PLA2G4AP47712 749 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 METAP2P50579 478 aaKnown RBP eCLIP20.12■□□□□ 0.81
TRAM1-201ENST00000262213 CCDC57Q2TAC2 916 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 TAF7LQ5H9L4 462 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 TAF3Q5VWG9 929 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 ZBTB9Q96C00 473 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 SLIT3O75094 1523 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 LONRF3Q496Y0 759 aa20.12■□□□□ 0.81
TRAM1-201ENST00000262213 CBFA2T2O43439 604 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms