RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.45■□□□□ 0.06
RFPL3-201ENST00000249007 PHAXQ9H814 394 aaKnown RBP15.45■□□□□ 0.06
RFPL3-201ENST00000249007 PRUNE2Q8WUY3 3088 aa15.44■□□□□ 0.06
RFPL3-201ENST00000249007 CTGFP29279 349 aa15.44■□□□□ 0.06
RFPL3-201ENST00000249007 CDAN1Q8IWY9 1227 aa15.44■□□□□ 0.06
RFPL3-201ENST00000249007 MYPNQ86TC9 1320 aa15.44■□□□□ 0.06
RFPL3-201ENST00000249007 SPDYE5A6NIY4 337 aa15.43■□□□□ 0.06
RFPL3-201ENST00000249007 FMNL1O95466 1100 aaPredicted RBP15.43■□□□□ 0.06
RFPL3-201ENST00000249007 SNAPC2Q13487 334 aa15.43■□□□□ 0.06
RFPL3-201ENST00000249007 C17orf99Q6UX52 265 aa15.43■□□□□ 0.06
RFPL3-201ENST00000249007 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.43■□□□□ 0.06
RFPL3-201ENST00000249007 TEPSINQ96N21 525 aa15.43■□□□□ 0.06
RFPL3-201ENST00000249007 METTL22Q9BUU2 404 aaPredicted RBP15.43■□□□□ 0.06
RFPL3-201ENST00000249007 MTMR10Q9NXD2 777 aa15.43■□□□□ 0.06
RFPL3-201ENST00000249007 CPA4Q9UI42 421 aa15.43■□□□□ 0.06
RFPL3-201ENST00000249007 SGPL1O95470 568 aa15.42■□□□□ 0.06
RFPL3-201ENST00000249007 NEUROD2Q15784 382 aa15.42■□□□□ 0.06
RFPL3-201ENST00000249007 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
RFPL3-201ENST00000249007 GDF15Q99988 308 aa15.42■□□□□ 0.06
RFPL3-201ENST00000249007 UNC93B1Q9H1C4 597 aa15.42■□□□□ 0.06
RFPL3-201ENST00000249007 IRF6O14896 467 aa15.41■□□□□ 0.06
RFPL3-201ENST00000249007 BMP8BP34820 402 aa15.41■□□□□ 0.06
RFPL3-201ENST00000249007 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
RFPL3-201ENST00000249007 ERO1BQ86YB8 467 aa15.41■□□□□ 0.06
RFPL3-201ENST00000249007 MPHOSPH8Q99549 860 aa15.41■□□□□ 0.06
RFPL3-201ENST00000249007 TMEM39BQ9GZU3 492 aa15.41■□□□□ 0.06
RFPL3-201ENST00000249007 ZNF70Q9UC06 446 aaPredicted RBP15.41■□□□□ 0.06
RFPL3-201ENST00000249007 MUC3AQ02505 3323 aa15.41■□□□□ 0.06
RFPL3-201ENST00000249007 LRIT3Q3SXY7 679 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 SLAIN1Q8ND83 568 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 TDRD3Q9H7E2 651 aaKnown RBP15.4■□□□□ 0.06
RFPL3-201ENST00000249007 JAG2Q9Y219 1238 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 SNCAIPQ9Y6H5 919 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 DDX58O95786 925 aaKnown RBP15.4■□□□□ 0.06
RFPL3-201ENST00000249007 PRKCZQ05513 592 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 CHRNDQ07001 517 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 ZNF804AQ7Z570 1209 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 ANP32EQ9BTT0 268 aa15.4■□□□□ 0.06
RFPL3-201ENST00000249007 TCP10L2B9ZVM9 353 aa15.39■□□□□ 0.05
RFPL3-201ENST00000249007 SNAP23O00161 211 aa15.39■□□□□ 0.05
RFPL3-201ENST00000249007 TFRCP02786 760 aaKnown RBP15.39■□□□□ 0.05
RFPL3-201ENST00000249007 IL1R1P14778 569 aa15.39■□□□□ 0.05
RFPL3-201ENST00000249007 ITGA6P23229 1130 aa15.39■□□□□ 0.05
RFPL3-201ENST00000249007 BCAMP50895 628 aa15.39■□□□□ 0.05
RFPL3-201ENST00000249007 IRS2Q9Y4H2 1338 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 ARAP2Q8WZ64 1704 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 ALPK3Q96L96 1907 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 TNNI2P48788 182 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 PPIL2Q13356 520 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 C15orf52Q6ZUT6 534 aaKnown RBP15.38■□□□□ 0.05
RFPL3-201ENST00000249007 CCER1Q8TC90 406 aaPredicted RBP15.38■□□□□ 0.05
RFPL3-201ENST00000249007 WRNIP1Q96S55 665 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 SERPINA10Q9UK55 444 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
RFPL3-201ENST00000249007 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
RFPL3-201ENST00000249007 CAPN2P17655 700 aa15.37■□□□□ 0.05
RFPL3-201ENST00000249007 FCGRTP55899 365 aa15.37■□□□□ 0.05
RFPL3-201ENST00000249007 ZKSCAN4Q969J2 545 aaPredicted RBP15.37■□□□□ 0.05
RFPL3-201ENST00000249007 PAWRQ96IZ0 340 aaKnown RBP15.37■□□□□ 0.05
RFPL3-201ENST00000249007 DEFB118Q96PH6 123 aa15.37■□□□□ 0.05
RFPL3-201ENST00000249007 ZMYND8Q9ULU4 1186 aaPredicted RBP15.37■□□□□ 0.05
RFPL3-201ENST00000249007 TRIM35Q9UPQ4 493 aa15.37■□□□□ 0.05
RFPL3-201ENST00000249007 ADGRA2Q96PE1 1338 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 PDHXO00330 501 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 TAF5LO75529 589 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 UBE3BQ7Z3V4 1068 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 ANKRD23Q86SG2 305 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 DZIP1LQ8IYY4 767 aaKnown RBP15.36■□□□□ 0.05
RFPL3-201ENST00000249007 C7orf61Q8IZ16 206 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 TDHQ8IZJ6 230 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 PRDM6Q9NQX0 595 aa15.36■□□□□ 0.05
RFPL3-201ENST00000249007 TTF2Q9UNY4 1162 aaKnown RBP15.36■□□□□ 0.05
RFPL3-201ENST00000249007 ADCY3O60266 1144 aa15.35■□□□□ 0.05
RFPL3-201ENST00000249007 INHAP05111 366 aa15.35■□□□□ 0.05
RFPL3-201ENST00000249007 NECAB2Q7Z6G3 386 aa15.35■□□□□ 0.05
RFPL3-201ENST00000249007 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.35■□□□□ 0.05
RFPL3-201ENST00000249007 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
RFPL3-201ENST00000249007 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
RFPL3-201ENST00000249007 ELNP15502 786 aa15.34■□□□□ 0.05
RFPL3-201ENST00000249007 NEXNQ0ZGT2 675 aa15.34■□□□□ 0.05
RFPL3-201ENST00000249007 CWF19L2Q2TBE0 894 aaKnown RBP15.34■□□□□ 0.05
RFPL3-201ENST00000249007 MFSD14BQ5SR56 506 aa15.34■□□□□ 0.05
RFPL3-201ENST00000249007 GABRQQ9UN88 632 aa15.34■□□□□ 0.05
RFPL3-201ENST00000249007 RPTORQ8N122 1335 aa15.34■□□□□ 0.05
RFPL3-201ENST00000249007 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.05
RFPL3-201ENST00000249007 MAGEA10P43363 369 aaPredicted RBP15.33■□□□□ 0.05
RFPL3-201ENST00000249007 PPATQ06203 517 aa15.33■□□□□ 0.05
RFPL3-201ENST00000249007 KSR2Q6VAB6 950 aa15.33■□□□□ 0.05
RFPL3-201ENST00000249007 CCDC146Q8IYE0 955 aa15.33■□□□□ 0.05
RFPL3-201ENST00000249007 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.05
RFPL3-201ENST00000249007 DIS3LQ8TF46 1054 aaKnown RBP15.33■□□□□ 0.05
RFPL3-201ENST00000249007 PAK6Q9NQU5 681 aaPredicted RBP15.33■□□□□ 0.05
RFPL3-201ENST00000249007 CDH23Q9H251 3354 aa15.33■□□□□ 0.04
RFPL3-201ENST00000249007 FLT3LGP49771 235 aa15.33■□□□□ 0.04
RFPL3-201ENST00000249007 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
RFPL3-201ENST00000249007 CRISPLD2Q9H0B8 497 aa15.33■□□□□ 0.04
RFPL3-201ENST00000249007 MGAMO43451 1857 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 FAM205AQ6ZU69 1335 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 NEURL1BA8MQ27 555 aa15.32■□□□□ 0.04
RFPL3-201ENST00000249007 H7C1W4 665 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms