RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 CHMP4CQ96CF2 233 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 ARMT1Q9H993 441 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 SPTLC3Q9NUV7 552 aa10.67□□□□□ -0.7
SYDE2-201ENST00000234668 CYP19A1P11511 503 aaPredicted RBP10.66□□□□□ -0.7
SYDE2-201ENST00000234668 PDIA4P13667 645 aaKnown RBP10.66□□□□□ -0.7
SYDE2-201ENST00000234668 ADD2P35612 726 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 TERF1P54274 439 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 FAM160A1Q05DH4 1040 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 TRDNQ13061 729 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 DPCR1Q3MIW9 517 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 SYNE3Q6ZMZ3 975 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 MAGEB6Q8N7X4 407 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 FBXO18Q8NFZ0 1043 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 CLIC6Q96NY7 704 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 PRDM10Q9NQV6 1147 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 KIF3AQ9Y496 699 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 SOS2Q07890 1332 aaPredicted RBP10.66□□□□□ -0.7
SYDE2-201ENST00000234668 KCPQ6ZWJ8 1503 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 PDE8BO95263 885 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 ADAMTS2O95450 1211 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 DHX40Q8IX18 779 aaKnown RBP10.66□□□□□ -0.7
SYDE2-201ENST00000234668 TACC3Q9Y6A5 838 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 UBN2Q6ZU65 1347 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 KIF1AQ12756 1690 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 SPTLC2O15270 562 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
SYDE2-201ENST00000234668 PDE6AP16499 860 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 BCAMP50895 628 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 MYSM1Q5VVJ2 828 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 MRPS27Q92552 414 aaKnown RBP10.66□□□□□ -0.7
SYDE2-201ENST00000234668 AIDAQ96BJ3 306 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 ALG1Q9BT22 464 aa10.66□□□□□ -0.7
SYDE2-201ENST00000234668 GNL2Q13823 731 aaKnown RBP10.65□□□□□ -0.7
SYDE2-201ENST00000234668 STX1AQ16623 288 aa10.65□□□□□ -0.7
SYDE2-201ENST00000234668 FMR1NBQ8N0W7 255 aaPredicted RBP10.65□□□□□ -0.7
SYDE2-201ENST00000234668 NEDD4P46934 1319 aa10.65□□□□□ -0.7
SYDE2-201ENST00000234668 RFX7Q2KHR2 1363 aa10.65□□□□□ -0.7
SYDE2-201ENST00000234668 MBD4O95243 580 aa10.65□□□□□ -0.71
SYDE2-201ENST00000234668 ZFYP08048 801 aaPredicted RBP10.65□□□□□ -0.71
SYDE2-201ENST00000234668 METAP2P50579 478 aaKnown RBP eCLIP10.65□□□□□ -0.71
SYDE2-201ENST00000234668 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.71
SYDE2-201ENST00000234668 TPD52L1Q16890 204 aaPredicted RBP10.65□□□□□ -0.71
SYDE2-201ENST00000234668 SUSD4Q5VX71 490 aa10.65□□□□□ -0.71
SYDE2-201ENST00000234668 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.65□□□□□ -0.71
SYDE2-201ENST00000234668 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.71
SYDE2-201ENST00000234668 GLI3P10071 1580 aa10.65□□□□□ -0.71
SYDE2-201ENST00000234668 hCG_1642624A0A1W2PR95 340 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 GUCY1A2P33402 732 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 EXOC5O00471 708 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 ZNF202O95125 648 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 TNNT1P13805 278 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 KIF23Q02241 960 aaPredicted RBP10.64□□□□□ -0.71
SYDE2-201ENST00000234668 RASGRF1Q13972 1273 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 RTEL1Q9NZ71 1219 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 ZSWIM5Q9P217 1185 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.64□□□□□ -0.71
SYDE2-201ENST00000234668 KCNJ14Q9UNX9 436 aa10.64□□□□□ -0.71
SYDE2-201ENST00000234668 V9GYY5 206 aaPredicted RBP10.64□□□□□ -0.71
SYDE2-201ENST00000234668 SMC2O95347 1197 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 LMOD1P29536 600 aaPredicted RBP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 ZRSR1Q15695 479 aaKnown RBP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 LRRFIP1Q32MZ4 808 aaKnown RBP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 TMEM67Q5HYA8 995 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 ADALQ6DHV7 355 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 VGLL2Q8N8G2 317 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 MPHOSPH8Q99549 860 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 SLC26A6Q9BXS9 759 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 ABCF2Q9UG63 623 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 ANGEL1Q9UNK9 670 aaKnown RBP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 RIC1Q4ADV7 1423 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 IFIT3O14879 490 aaKnown RBP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 NPHP1O15259 732 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 GOLGA8FQ08AF8 430 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 GOLGA8DPQ0D2H9 430 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 GLIPR1L2Q4G1C9 344 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 ANO1Q5XXA6 986 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 KRT40Q6A162 431 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 STRBPQ96SI9 672 aaKnown RBP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 EPB41L4AQ9HCS5 686 aaPredicted RBP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 ANO10Q9NW15 660 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 PDE8AO60658 829 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 SKILP12757 684 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 PFKFB1P16118 471 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 CBX1P83916 185 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 SLC4A8Q2Y0W8 1093 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 APOA5Q6Q788 366 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 BICDL1Q6ZP65 573 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 VPS37DQ86XT2 251 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 LRRC8AQ8IWT6 810 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.63□□□□□ -0.71
SYDE2-201ENST00000234668 NUP133Q8WUM0 1156 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 ZMYND15Q9H091 742 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 NAPBQ9H115 298 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 KIAA1468Q9P260 1216 aa10.63□□□□□ -0.71
SYDE2-201ENST00000234668 MROH7-TTC4A0A0A0MT08 1334 aa10.62□□□□□ -0.71
SYDE2-201ENST00000234668 CCDC69A6NI79 296 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms