RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 CHGBP05060 677 aa32.99■■■□□ 2.87
CHMP4B-201ENST00000217402 DPY19L2Q6NUT2 758 aa32.99■■■□□ 2.87
CHMP4B-201ENST00000217402 RPS12P25398 132 aaKnown RBP32.98■■■□□ 2.87
CHMP4B-201ENST00000217402 SCNN1DP51172 638 aa32.98■■■□□ 2.87
CHMP4B-201ENST00000217402 SLC9C2Q5TAH2 1124 aa32.98■■■□□ 2.87
CHMP4B-201ENST00000217402 MAGEB6Q8N7X4 407 aa32.98■■■□□ 2.87
CHMP4B-201ENST00000217402 NSUN4Q96CB9 384 aaKnown RBP32.98■■■□□ 2.87
CHMP4B-201ENST00000217402 AK9Q5TCS8 1911 aa32.97■■■□□ 2.87
CHMP4B-201ENST00000217402 DIXDC1Q155Q3 683 aa32.97■■■□□ 2.87
CHMP4B-201ENST00000217402 ZNF384Q8TF68 577 aa32.97■■■□□ 2.87
CHMP4B-201ENST00000217402 MAST2Q6P0Q8 1798 aa32.96■■■□□ 2.87
CHMP4B-201ENST00000217402 PDE6AP16499 860 aa32.96■■■□□ 2.87
CHMP4B-201ENST00000217402 SLFNL1Q499Z3 407 aa32.96■■■□□ 2.87
CHMP4B-201ENST00000217402 MAST3O60307 1309 aa32.96■■■□□ 2.87
CHMP4B-201ENST00000217402 USP17L8P0C7I0 530 aa32.95■■■□□ 2.87
CHMP4B-201ENST00000217402 NAA16Q6N069 864 aaPredicted RBP32.95■■■□□ 2.87
CHMP4B-201ENST00000217402 SHTN1A0MZ66 631 aa32.95■■■□□ 2.86
CHMP4B-201ENST00000217402 GLTPD2A6NH11 291 aa32.94■■■□□ 2.86
CHMP4B-201ENST00000217402 ZSCAN25Q6NSZ9 544 aa32.94■■■□□ 2.86
CHMP4B-201ENST00000217402 OGFOD1Q8N543 542 aa32.94■■■□□ 2.86
CHMP4B-201ENST00000217402 ZNF532Q9HCE3 1301 aa32.93■■■□□ 2.86
CHMP4B-201ENST00000217402 ADD2P35612 726 aa32.93■■■□□ 2.86
CHMP4B-201ENST00000217402 LRRFIP1Q32MZ4 808 aaKnown RBP32.93■■■□□ 2.86
CHMP4B-201ENST00000217402 MICALL2Q8IY33 904 aa32.93■■■□□ 2.86
CHMP4B-201ENST00000217402 DPF2Q92785 391 aa32.93■■■□□ 2.86
CHMP4B-201ENST00000217402 RNF113AO15541 343 aaKnown RBP32.92■■■□□ 2.86
CHMP4B-201ENST00000217402 CYP7A1P22680 504 aa32.92■■■□□ 2.86
CHMP4B-201ENST00000217402 HDAC9Q9UKV0 1011 aa32.92■■■□□ 2.86
CHMP4B-201ENST00000217402 MYH7P12883 1935 aa32.92■■■□□ 2.86
CHMP4B-201ENST00000217402 GSTO1P78417 241 aa32.91■■■□□ 2.86
CHMP4B-201ENST00000217402 CNOT7Q9UIV1 285 aaKnown RBP32.91■■■□□ 2.86
CHMP4B-201ENST00000217402 RFX7Q2KHR2 1363 aa32.91■■■□□ 2.86
CHMP4B-201ENST00000217402 ADAMTSL1Q8N6G6 1762 aa32.91■■■□□ 2.86
CHMP4B-201ENST00000217402 ADGRA1Q86SQ6 560 aa32.91■■■□□ 2.86
CHMP4B-201ENST00000217402 TEKT1Q969V4 418 aa32.91■■■□□ 2.86
CHMP4B-201ENST00000217402 GPRC5DQ9NZD1 345 aa32.91■■■□□ 2.86
CHMP4B-201ENST00000217402 TCRBV5S4A2TA0A5A2 114 aa32.9■■■□□ 2.86
CHMP4B-201ENST00000217402 ZFYP08048 801 aaPredicted RBP32.9■■■□□ 2.86
CHMP4B-201ENST00000217402 CRKP46108 304 aa32.9■■■□□ 2.86
CHMP4B-201ENST00000217402 RBM5P52756 815 aaKnown RBP eCLIP32.9■■■□□ 2.86
CHMP4B-201ENST00000217402 DIAPH3Q9NSV4 1193 aa32.9■■■□□ 2.86
CHMP4B-201ENST00000217402 IGSF3O75054 1194 aa32.89■■■□□ 2.86
CHMP4B-201ENST00000217402 UBE3CQ15386 1083 aa32.89■■■□□ 2.86
CHMP4B-201ENST00000217402 MROH7-TTC4A0A0A0MT08 1334 aa32.89■■■□□ 2.86
CHMP4B-201ENST00000217402 LMOD1P29536 600 aaPredicted RBP32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 SLF2Q8IX21 1173 aa32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 SERPINA10Q9UK55 444 aa32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 PCDHAC2Q9Y5I4 1007 aa32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 MIGA1Q8NAN2 632 aa32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 L3MBTL3Q96JM7 780 aaPredicted RBP32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 FAM227BQ96M60 508 aa32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 DAGLAQ9Y4D2 1042 aa32.88■■■□□ 2.85
CHMP4B-201ENST00000217402 LDHCP07864 332 aa32.87■■■□□ 2.85
CHMP4B-201ENST00000217402 EPS15P42566 896 aa32.87■■■□□ 2.85
CHMP4B-201ENST00000217402 ZNF280AP59817 542 aaPredicted RBP32.87■■■□□ 2.85
CHMP4B-201ENST00000217402 HDLBPQ00341 1268 aaKnown RBP32.87■■■□□ 2.85
CHMP4B-201ENST00000217402 NMIQ13287 307 aaPredicted RBP32.87■■■□□ 2.85
CHMP4B-201ENST00000217402 CFAP100Q494V2 611 aa32.87■■■□□ 2.85
CHMP4B-201ENST00000217402 MYH2Q9UKX2 1941 aa32.86■■■□□ 2.85
CHMP4B-201ENST00000217402 H7C1D1 291 aa32.86■■■□□ 2.85
CHMP4B-201ENST00000217402 HIP1O00291 1037 aa32.86■■■□□ 2.85
CHMP4B-201ENST00000217402 CHMLP26374 656 aa32.86■■■□□ 2.85
CHMP4B-201ENST00000217402 HHIPL2Q6UWX4 724 aa32.86■■■□□ 2.85
CHMP4B-201ENST00000217402 APPBP2Q92624 585 aa32.86■■■□□ 2.85
CHMP4B-201ENST00000217402 MYOZ2Q9NPC6 264 aa32.86■■■□□ 2.85
CHMP4B-201ENST00000217402 A0A0D9SFI3 127 aa32.85■■■□□ 2.85
CHMP4B-201ENST00000217402 CDC45O75419 566 aa32.85■■■□□ 2.85
CHMP4B-201ENST00000217402 RBM26Q5T8P6 1007 aaKnown RBP32.85■■■□□ 2.85
CHMP4B-201ENST00000217402 GAKO14976 1311 aa32.85■■■□□ 2.85
CHMP4B-201ENST00000217402 ZMYM1Q5SVZ6 1142 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 TMED8Q6PL24 325 aaPredicted RBP32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 CWC27Q6UX04 472 aaKnown RBP32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 SAMD7Q7Z3H4 446 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 TICAM2Q86XR7 235 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 SEC62Q99442 399 aaKnown RBP32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 EGFRP00533 1210 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 BTDP43251 543 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 DLGAP5Q15398 846 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 TBC1D10BQ4KMP7 808 aaPredicted RBP32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 OSBP2Q969R2 916 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 FAM163AQ96GL9 167 aaPredicted RBP32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 MRIQ9BWK5 157 aa32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 PUS7LQ9H0K6 701 aaKnown RBP32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 AATFQ9NY61 560 aaKnown RBP eCLIP32.84■■■□□ 2.85
CHMP4B-201ENST00000217402 ZNF526Q8TF50 670 aaPredicted RBP32.83■■■□□ 2.85
CHMP4B-201ENST00000217402 ZDHHC15Q96MV8 337 aa32.83■■■□□ 2.85
CHMP4B-201ENST00000217402 M0R2C6 588 aa32.82■■■□□ 2.84
CHMP4B-201ENST00000217402 NOL10Q9BSC4 688 aaKnown RBP32.82■■■□□ 2.84
CHMP4B-201ENST00000217402 MMP14P50281 582 aa32.81■■■□□ 2.84
CHMP4B-201ENST00000217402 DYNLL1P63167 89 aaKnown RBP32.81■■■□□ 2.84
CHMP4B-201ENST00000217402 KIF4BQ2VIQ3 1234 aa32.81■■■□□ 2.84
CHMP4B-201ENST00000217402 HACL1Q9UJ83 578 aa32.81■■■□□ 2.84
CHMP4B-201ENST00000217402 WDR90Q96KV7 1748 aa32.81■■■□□ 2.84
CHMP4B-201ENST00000217402 GPR75-ASB3A0A0A6YYF3 556 aa32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 MAGEB6P1A0A0J9YX57 407 aa32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 APOBEC3HQ6NTF7 200 aaKnown RBP32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 TRPM4Q8TD43 1214 aa32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 SPDYE2BA6NHP3 402 aa32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 MBD4O95243 580 aa32.8■■■□□ 2.84
CHMP4B-201ENST00000217402 SPDYE6P0CI01 402 aa32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms