RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 SPIN2BQ9BPZ2 258 aa11.31□□□□□ -0.6
SRRM4-204ENST00000641899 TMEM59Q9BXS4 323 aa11.31□□□□□ -0.6
SRRM4-204ENST00000641899 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 A0A1W2PPK0 400 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 UBE2CO00762 179 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 SPRY2O43597 315 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 NAPSAO96009 420 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 SERPINB10P48595 397 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 ETV1P50549 477 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 DEFA5Q01523 94 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 OR4A47Q6IF82 309 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 C8orf59Q8N0T1 100 aaPredicted RBP11.3□□□□□ -0.6
SRRM4-204ENST00000641899 WDR89Q96FK6 387 aaPredicted RBP11.3□□□□□ -0.6
SRRM4-204ENST00000641899 TSC22D3Q99576 134 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 PARP12Q9H0J9 701 aaKnown RBP11.3□□□□□ -0.6
SRRM4-204ENST00000641899 AKIP1Q9NQ31 210 aa11.3□□□□□ -0.6
SRRM4-204ENST00000641899 ZNF230Q9UIE0 474 aaPredicted RBP11.3□□□□□ -0.6
SRRM4-204ENST00000641899 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 LOC100130705A0A1B0GUX0 176 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 GSTT2P0CG29 244 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 GSTT2BP0CG30 244 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 RPS27AP62979 156 aaKnown RBP11.29□□□□□ -0.6
SRRM4-204ENST00000641899 PJVKQ0ZLH3 352 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 TNXAQ16473 311 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 SLC38A6Q8IZM9 456 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 TEX45Q8NA69 505 aa11.29□□□□□ -0.6
SRRM4-204ENST00000641899 FRAS1Q86XX4 4008 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 BPNT1O95861 308 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 CRYGBP07316 175 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 APELAP0DMC3 54 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 CBLN1P23435 193 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 CNPY1Q3B7I2 92 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 RBPMS2Q6ZRY4 209 aaKnown RBP11.28□□□□□ -0.6
SRRM4-204ENST00000641899 GPHB5Q86YW7 130 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 SRSF12Q8WXF0 261 aaKnown RBP11.28□□□□□ -0.6
SRRM4-204ENST00000641899 ACOT12Q8WYK0 555 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 DGCR14Q96DF8 476 aaKnown RBP11.28□□□□□ -0.6
SRRM4-204ENST00000641899 DERL3Q96Q80 235 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 URM1Q9BTM9 101 aaKnown RBP11.28□□□□□ -0.6
SRRM4-204ENST00000641899 C12orf4Q9NQ89 552 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 OR1A1Q9P1Q5 309 aa11.28□□□□□ -0.6
SRRM4-204ENST00000641899 DIMT1Q9UNQ2 313 aaKnown RBP11.28□□□□□ -0.6
SRRM4-204ENST00000641899 TRAV25A0A0B4J276 109 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 CCDC160A6NGH7 325 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 DEDDO75618 318 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 UBE2KP61086 200 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 RPS11P62280 158 aaKnown RBP eCLIP11.27□□□□□ -0.61
SRRM4-204ENST00000641899 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
SRRM4-204ENST00000641899 MED22Q15528 200 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 PRSS8Q16651 343 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 C15orf32Q32M92 178 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 TMEM177Q53S58 311 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 RBM48Q5RL73 367 aaKnown RBP11.27□□□□□ -0.61
SRRM4-204ENST00000641899 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 PGLYRP3Q96LB9 341 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 TM2D1Q9BX74 207 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 RDH8Q9NYR8 311 aa11.27□□□□□ -0.61
SRRM4-204ENST00000641899 TRBV9A0A0B4J1U6 114 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 ZNF320A2RRD8 509 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 PROP1O75360 226 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 DHFRP00374 187 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 SRMP19623 302 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 HTR2CP28335 458 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 RANBP1P43487 201 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 ALDH3B2P48448 385 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 MRPS15P82914 257 aaKnown RBP11.26□□□□□ -0.61
SRRM4-204ENST00000641899 TM4SF20Q53R12 229 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 TMEM61Q8N0U2 210 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 OR1L6Q8NGR2 347 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
SRRM4-204ENST00000641899 MARC2Q969Z3 335 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 TMEM80Q96HE8 168 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 MFFQ9GZY8 342 aa11.26□□□□□ -0.61
SRRM4-204ENST00000641899 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
SRRM4-204ENST00000641899 KIR2DL5BA0A0G2JN68 375 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 KIR2DL5BA0A0G2JPC4 375 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 OR2C1O95371 312 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 IFNA4P05014 189 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 TCTAP57738 103 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 GPR141Q7Z602 305 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 KIR2DL5AQ8N109 375 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 TTC9CQ8N5M4 171 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 ZFP41Q8N8Y5 198 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 OSR1Q8TAX0 266 aaPredicted RBP11.25□□□□□ -0.61
SRRM4-204ENST00000641899 GGHQ92820 318 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 CENPOQ9BU64 300 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 OR2D2Q9H210 308 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 Q9N2K0 584 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 VCX3AQ9NNX9 186 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 BLOC1S6Q9UL45 172 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
SRRM4-204ENST00000641899 TRDCB7Z8K6 153 aa11.24□□□□□ -0.61
SRRM4-204ENST00000641899 PPP5D1E7EU14 171 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms