RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 PLSCR2Q9NRY7 297 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 FOXD3Q9UJU5 478 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-223ENST00000640640 CREBBPQ92793 2442 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 IGHV3-21A0A0B4J1V1 117 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 PQLC2LA1A4F0 135 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 DANCRP0C864 163 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 PMS2P11Q13670 270 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 FAM209AQ5JX71 171 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 ACP7Q6ZNF0 438 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 LPAR2Q9HBW0 351 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 CLDN16Q9Y5I7 305 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 HSPB1P04792 205 aaKnown RBP14.93□□□□□ -0.02
SCARB2-223ENST00000640640 WDR73Q6P4I2 378 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 DHRS11Q6UWP2 260 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 OR8I2Q8N0Y5 310 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 C9orf106Q8NAJ2 232 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 TMEM171Q8WVE6 324 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 GUCD1Q96NT3 240 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 RNF115Q9Y4L5 304 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 GFRA3O60609 400 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 MEGF10Q96KG7 1140 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 MS4A10Q96PG2 267 aa14.93□□□□□ -0.02
SCARB2-223ENST00000640640 ACSF3Q4G176 576 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-223ENST00000640640 TOMM20LQ6UXN7 152 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 Q8WTZ3 238 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 RNF222A6NCQ9 220 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 IQCJQ1A5X6 159 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 ZNF729A6NN14 1252 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-223ENST00000640640 PROB1E7EW31 1015 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 SLC31A2O15432 143 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 SRSF10O75494 262 aaKnown RBP14.92□□□□□ -0.02
SCARB2-223ENST00000640640 FGFBP3Q8TAT2 258 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 SMIM8Q96KF7 97 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 TMEM204Q9BSN7 226 aa14.92□□□□□ -0.02
SCARB2-223ENST00000640640 RSPO3Q9BXY4 272 aaPredicted RBP14.92□□□□□ -0.02
SCARB2-223ENST00000640640 CRISP2P16562 243 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 WNT5AP41221 380 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 FA2HQ7L5A8 372 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 GGNQ86UU5 652 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 FAM216AQ8WUB2 273 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 MARVELD3Q96A59 401 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 TCF19Q9Y242 345 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 WASHC3Q9Y3C0 194 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 ARL2-SNX15V9GYD0 113 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 IGHV2OR16-5A0A0B4J2B6 119 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 CEACAM18A8MTB9 384 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 CDK2AP1O14519 115 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 CRYGSP22914 178 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 MEOX2P50222 304 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 SLC16A13Q7RTY0 426 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 LOC102723971A0A1B0GUV8 181 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 SSX7Q7RTT5 188 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 MMD2Q8IY49 270 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 RAB24Q969Q5 203 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 HILPDAQ9Y5L2 63 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 TRAV14DV4A0A0A6YYC5 116 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 ZNF735P0CB33 412 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 MIC13Q5XKP0 118 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 ABHD17AQ96GS6 310 aa14.91□□□□□ -0.02
SCARB2-223ENST00000640640 EIF3GO75821 320 aaKnown RBP eCLIP14.9□□□□□ -0.02
SCARB2-223ENST00000640640 RND3P61587 244 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 VKORC1L1Q8N0U8 176 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 SLC25A17O43808 307 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 FOXG1P55316 489 aaPredicted RBP14.9□□□□□ -0.02
SCARB2-223ENST00000640640 RNASEKQ6P5S7 137 aaKnown RBP14.9□□□□□ -0.02
SCARB2-223ENST00000640640 NABP1Q96AH0 204 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 GOSR1O95249 250 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 PLAURQ03405 335 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 KLHDC1Q8N7A1 406 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 FAM222BQ8WU58 562 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 CADP27708 2225 aa14.9□□□□□ -0.02
SCARB2-223ENST00000640640 IGKV3D-15A0A087WSY6 115 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 SNRPCP09234 159 aaKnown RBP14.89□□□□□ -0.03
SCARB2-223ENST00000640640 HTR1DP28221 377 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 HCP5Q6MZN7 132 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 ABHD12Q8N2K0 398 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 BMPERQ8N8U9 685 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 GRAMD2BQ96HH9 432 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 FUT9Q9Y231 359 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 ZNF253O75346 499 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 NDUFB4O95168 129 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 LINC00869P0C866 280 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 COL8A1P27658 744 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 AMTP48728 403 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 RANP62826 216 aaKnown RBP14.89□□□□□ -0.03
SCARB2-223ENST00000640640 COX19Q49B96 90 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 LY6G6FQ5SQ64 297 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 IGSF23A1L1A6 192 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 H0YL77 283 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 CD40P25942 277 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 PAX6P26367 422 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 SELENOTP62341 195 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 SRD5A3Q9H8P0 318 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 IQCF6A8MYZ5 107 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 KBTBD11O94819 623 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 SGMS2Q8NHU3 365 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 IFT22Q9H7X7 185 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 ELOVL5Q9NYP7 299 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 ABCA1O95477 2261 aa14.89□□□□□ -0.03
SCARB2-223ENST00000640640 FANCMQ8IYD8 2048 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms