RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 SPSB4Q96A44 273 aa11.42□□□□□ -0.58
UBE3A-228ENST00000638155 CST9LQ9H4G1 147 aa11.42□□□□□ -0.58
UBE3A-228ENST00000638155 A8MWV9 139 aa11.42□□□□□ -0.58
UBE3A-228ENST00000638155 H3BUT2 72 aa11.42□□□□□ -0.58
UBE3A-228ENST00000638155 SNRPCP09234 159 aaKnown RBP11.42□□□□□ -0.58
UBE3A-228ENST00000638155 FCARP24071 287 aa11.42□□□□□ -0.58
UBE3A-228ENST00000638155 PRSS53Q2L4Q9 553 aa11.42□□□□□ -0.58
UBE3A-228ENST00000638155 SH3BGRL3Q9H299 93 aa11.42□□□□□ -0.58
UBE3A-228ENST00000638155 ITGB4P16144 1822 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 TRAV8-1A0A0A6YYK1 113 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 ATXN7O15265 892 aaPredicted RBP11.41□□□□□ -0.58
UBE3A-228ENST00000638155 CAMTA1Q9Y6Y1 1673 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 TMEFF2Q9UIK5 374 aaPredicted RBP11.41□□□□□ -0.58
UBE3A-228ENST00000638155 TM4SF4P48230 202 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 ATP5G2Q06055 141 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 C17orf47Q8NEP4 570 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 GPBAR1Q8TDU6 330 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 PIK3C2AO00443 1686 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 NR2C2APQ86WQ0 139 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 IGKV6D-21A0A0A0MT36 114 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 METTL12A8MUP2 240 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 LINC00518Q8N0U6 118 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 SOCS1O15524 211 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 TMEM86BQ8N661 226 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 ZNF257Q9Y2Q1 563 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 PGPA6NDG6 321 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.41□□□□□ -0.58
UBE3A-228ENST00000638155 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
UBE3A-228ENST00000638155 NAPSAO96009 420 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
UBE3A-228ENST00000638155 GFERP55789 205 aa11.41□□□□□ -0.58
UBE3A-228ENST00000638155 SNAI2O43623 268 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 TJP1Q07157 1748 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 TDGF1P3P51864 188 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 CADM4Q8NFZ8 388 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 C5P01031 1676 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 P2RY4P51582 365 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 CCL7P80098 99 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 MMD2Q8IY49 270 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 ISG15P05161 165 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 GPR183P32249 361 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 IGLV3-10A0A075B6K4 115 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 RPL27AP46776 148 aaKnown RBP11.4□□□□□ -0.58
UBE3A-228ENST00000638155 GGTLC2Q14390 218 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 KIAA1644Q3SXP7 199 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 SPEM1Q8N4L4 309 aa11.4□□□□□ -0.58
UBE3A-228ENST00000638155 VWC2LB2RUY7 222 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 RPL36A-HNRNPH2H7BZ11 118 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 CBLN1P23435 193 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 HILPDAQ9Y5L2 63 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 TNFRSF6BO95407 300 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 COL10A1Q03692 680 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 OR51G1Q8NGK1 321 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 SPANXA1Q9NS26 97 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 TOGARAM1Q9Y4F4 1720 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 LSM6P62312 80 aaKnown RBP11.39□□□□□ -0.59
UBE3A-228ENST00000638155 RUNX1Q01196 453 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 ZNF415Q09FC8 603 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 MARVELD3Q96A59 401 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 PRR35P0CG20 571 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 TIMM23BQ5SRD1 257 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 CACNA1BQ00975 2339 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 FOXI3A8MTJ6 420 aaPredicted RBP11.39□□□□□ -0.59
UBE3A-228ENST00000638155 C9JCJ5 164 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 HCP5Q6MZN7 132 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 C1orf210Q8IVY1 113 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 MRPL32Q9BYC8 188 aaKnown RBP11.39□□□□□ -0.59
UBE3A-228ENST00000638155 LAMB2P55268 1798 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 THY1P04216 161 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 CD300CQ08708 224 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 GAGE13Q4V321 117 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 OR4X2Q8NGF9 303 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 ST6GALNAC6Q969X2 333 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 SDF2L1Q9HCN8 221 aa11.39□□□□□ -0.59
UBE3A-228ENST00000638155 LILRA5A6NI73 299 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 F8WEM9 126 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 ETHE1O95571 254 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 TP53I13Q8NBR0 393 aaPredicted RBP11.38□□□□□ -0.59
UBE3A-228ENST00000638155 MZB1Q8WU39 189 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 LOC390937A0A1W2PQ73 354 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 TRA2AQ13595 282 aaKnown RBP eCLIP11.38□□□□□ -0.593e-7■□□□□ 10
UBE3A-228ENST00000638155 FBLN7Q53RD9 439 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 CHST5Q9GZS9 411 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 M0R2P5 195 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 PEX7O00628 323 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 MPZL1O95297 269 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 APOHP02749 345 aaPredicted RBP11.38□□□□□ -0.59
UBE3A-228ENST00000638155 WDR54Q9H977 334 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 LEPP41159 167 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 SLC25A53Q5H9E4 307 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 SUMO4Q6EEV6 95 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 SSC4DQ8WTU2 575 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 DCTN5Q9BTE1 182 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 NPIPB4C9JG80 1138 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 LDLRAD2Q5SZI1 272 aa11.38□□□□□ -0.59
UBE3A-228ENST00000638155 BTAF1O14981 1849 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms