RNA–Protein interactions for RNA: ENST00000637686.1

CLN3-261, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 533 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-261ENST00000637686 MPPED1O15442 326 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 TXNL1O43396 289 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 CREBL2O60519 120 aaPredicted RBP7.9□□□□□ -1.14
CLN3-261ENST00000637686 TSPAN9O75954 239 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 DUS4LO95620 317 aaKnown RBP7.9□□□□□ -1.14
CLN3-261ENST00000637686 IGLV2-14P01704 120 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 ANXA3P12429 323 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 BRS3P32247 399 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 REG1BP48304 166 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 SRPXP78539 464 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 CATR1Q13166 79 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 DHRS2Q13268 280 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 EIF4EBP1Q13541 118 aaPredicted RBP7.9□□□□□ -1.14
CLN3-261ENST00000637686 ZNF818PQ6ZRF7 136 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 ZNF833PQ6ZTB9 187 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 LYG2Q86SG7 212 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 DRAM1Q8N682 238 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 CAPSLQ8WWF8 208 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 RTN4IP1Q8WWV3 396 aaPredicted RBP7.9□□□□□ -1.14
CLN3-261ENST00000637686 TMEM230Q96A57 120 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 S1PR3Q99500 378 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 ZNF747Q9BV97 191 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 PARP12Q9H0J9 701 aaKnown RBP7.9□□□□□ -1.14
CLN3-261ENST00000637686 OR2D2Q9H210 308 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 C16orf95Q9H693 158 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 NAA60Q9H7X0 242 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 CCL28Q9NRJ3 127 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 LIN7CQ9NUP9 197 aaKnown RBP7.9□□□□□ -1.14
CLN3-261ENST00000637686 SDHAF2Q9NX18 166 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 PITPNC1Q9UKF7 332 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 FLVCR2Q9UPI3 526 aa7.9□□□□□ -1.14
CLN3-261ENST00000637686 STAB1Q9NY15 2570 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 A0A1B0GUS0 222 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 DUXBA0A1W2PPF3 345 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 A0A1W2PPI3 338 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 C9orf170A2RU37 121 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 H0Y980 276 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 HSD17B6O14756 317 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 TIMM23O14925 209 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 ST8SIA5O15466 376 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 RBFOX2O43251 390 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLN3-261ENST00000637686 SFT2D2O95562 160 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 GAPDHP04406 335 aaKnown RBP7.89□□□□□ -1.15
CLN3-261ENST00000637686 FAM106CPP0CH98 169 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 VSIG10L2P0DP72 767 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 RPA2P15927 270 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 ANXA7P20073 488 aaKnown RBP7.89□□□□□ -1.15
CLN3-261ENST00000637686 F2RP25116 425 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 KIR2DS2P43631 304 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 GPR12P47775 334 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 FBLN7Q53RD9 439 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 TMED4Q7Z7H5 227 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 ODF3L1Q8IXM7 274 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 LYG1Q8N1E2 194 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 LRTM2Q8N967 370 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 CD300LFQ8TDQ1 290 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 ZNF431Q8TF32 576 aaPredicted RBP7.89□□□□□ -1.15
CLN3-261ENST00000637686 MITD1Q8WV92 249 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 ASB13Q8WXK3 278 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 IL22RA2Q969J5 263 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 ST6GALNAC6Q969X2 333 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 ZNF251Q9BRH9 671 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 NPFFR1Q9GZQ6 430 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 SIGLEC9Q9Y336 463 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 RNF114Q9Y508 228 aa7.89□□□□□ -1.15
CLN3-261ENST00000637686 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 A0A0B4J293 547 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 IGHV1-3A0A0C4DH29 117 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 FAM90A9PA6NNJ1 464 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 HAX1O00165 279 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 PGLYRP1O75594 196 aaPredicted RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 HLA-AP01891 365 aaKnown RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 SNRNP70P08621 437 aaKnown RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 HLA-GP17693 338 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 UCP1P25874 307 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 DUTP33316 252 aaKnown RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 THBS3P49746 956 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 SUPT4H1P63272 117 aaKnown RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 ZNF816Q0VGE8 651 aaPredicted RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 PPP1R1AQ13522 171 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 C4orf46Q504U0 113 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 MOB3BQ86TA1 216 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 THNSL2Q86YJ6 484 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 CADM3Q8N126 398 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 OR8H3Q8N146 312 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 ADAD2Q8NCV1 583 aaKnown RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 OR4C13Q8NGP0 309 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 COQ8AQ8NI60 647 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 CFHR4Q92496 578 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 PHB2Q99623 299 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 SLC25A33Q9BSK2 321 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 RANBP3Q9H6Z4 567 aaPredicted RBP7.88□□□□□ -1.15
CLN3-261ENST00000637686 ALG5Q9Y673 324 aa7.88□□□□□ -1.15
CLN3-261ENST00000637686 TENM1Q9UKZ4 2725 aa7.87□□□□□ -1.15
CLN3-261ENST00000637686 SAA2-SAA4A0A096LPE2 208 aa7.87□□□□□ -1.15
CLN3-261ENST00000637686 TEX13DA0A0J9YY54 714 aaPredicted RBP7.87□□□□□ -1.15
CLN3-261ENST00000637686 C3orf85A0A1B0GTC6 90 aa7.87□□□□□ -1.15
CLN3-261ENST00000637686 DBX1A6NMT0 343 aa7.87□□□□□ -1.15
CLN3-261ENST00000637686 PROP1O75360 226 aa7.87□□□□□ -1.15
CLN3-261ENST00000637686 IGKV1D-33P01593 117 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms