RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 HIST1H1EP10412 219 aaKnown RBP13.53□□□□□ -0.24
CLN5-218ENST00000637397 TSPAN7P41732 249 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 PQLC2Q6ZP29 291 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 VKORC1L1Q8N0U8 176 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 C18orf12Q96KH6 178 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 IGKV1D-13A0A0B4J2D9 117 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 NCBP2LA6PVI3 153 aaKnown RBP13.53□□□□□ -0.24
CLN5-218ENST00000637397 RHBDL1O75783 438 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 IGKV1-13P0DP09 117 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 HIST1H1BP16401 226 aaKnown RBP13.53□□□□□ -0.24
CLN5-218ENST00000637397 FXYD3Q14802 87 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 IBA57Q5T440 356 aaKnown RBP13.53□□□□□ -0.24
CLN5-218ENST00000637397 CDCP2Q5VXM1 449 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 CYP2G1PQ6ZSU1 146 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 OR1L8Q8NGR8 309 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 WASHC3Q9Y3C0 194 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 CD99P14209 185 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 CCL1P22362 96 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 ICAM4Q14773 271 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 LRRC75BQ2VPJ9 315 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 OR2V2Q96R30 315 aa13.53□□□□□ -0.24
CLN5-218ENST00000637397 K7N7A8 449 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 GDF9O60383 454 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 OR2J3O76001 311 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 MT-ND6P03923 174 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 K7ESF4 209 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 CRYABP02511 175 aaKnown RBP13.52□□□□□ -0.24
CLN5-218ENST00000637397 COX5BP10606 129 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 PLAURQ03405 335 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 OR5P3Q8WZ94 311 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 SDF2L1Q9HCN8 221 aa13.52□□□□□ -0.24
CLN5-218ENST00000637397 TRGV8A0A0C4DH27 118 aa13.52□□□□□ -0.25
CLN5-218ENST00000637397 C5orf52A6NGY3 159 aa13.52□□□□□ -0.25
CLN5-218ENST00000637397 ZDHHC16Q969W1 377 aa13.52□□□□□ -0.25
CLN5-218ENST00000637397 IGHV3-21A0A0B4J1V1 117 aa13.52□□□□□ -0.25
CLN5-218ENST00000637397 EFNA2O43921 213 aa13.52□□□□□ -0.25
CLN5-218ENST00000637397 TMEM56-RWDD3S4R434 201 aa13.52□□□□□ -0.25
CLN5-218ENST00000637397 ZNF785A8K8V0 405 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 ISLRO14498 428 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BKO60814 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BJP06899 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 CBLN1P23435 193 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BOP23527 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BBP33778 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BDP58876 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BCP62807 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 SPEM2Q0P670 501 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST2H2BEQ16778 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 SLC25A53Q5H9E4 307 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.51□□□□□ -0.25
CLN5-218ENST00000637397 TGIF2LYQ8IUE0 185 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BHQ93079 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BNQ99877 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HIST1H2BMQ99879 126 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 J3QR89 54 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 FAM87AP0C7U9 286 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 ADCYAP1P18509 176 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 SSTR5P35346 364 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 FAM214BQ7L5A3 538 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 PAXXQ9BUH6 204 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 TMEM140Q9NV12 185 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 ODAMA1E959 279 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 CRYBB3P26998 211 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 SFRP2Q96HF1 295 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 PLAUP00749 431 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 RNF224P0DH78 156 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 ZNF441Q8N8Z8 693 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 ONECUT1Q9UBC0 465 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 HEATR5AQ86XA9 2040 aa13.51□□□□□ -0.25
CLN5-218ENST00000637397 SPATA45Q537H7 98 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 GFRALQ6UXV0 394 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 FADS6Q8N9I5 356 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 NHLRC2Q8NBF2 726 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 LEAP2Q969E1 77 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 KLK10O43240 276 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 HINT1P49773 126 aaPredicted RBP13.5□□□□□ -0.25
CLN5-218ENST00000637397 KLF14Q8TD94 323 aaPredicted RBP13.5□□□□□ -0.25
CLN5-218ENST00000637397 HEPN1Q6WQI6 88 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 ZNF600Q6ZNG1 722 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 ZNF525Q8N782 197 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 NPCDR1Q9BY65 106 aa13.5□□□□□ -0.25
CLN5-218ENST00000637397 LINC00869P0C866 280 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 DEFB124Q8NES8 71 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 OR4B1Q8NGF8 309 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 PERPQ96FX8 193 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 REPIN1Q9BWE0 567 aaKnown RBP13.49□□□□□ -0.25
CLN5-218ENST00000637397 TCF19Q9Y242 345 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 SOD3P08294 240 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 RPL31P62899 125 aaKnown RBP13.49□□□□□ -0.25
CLN5-218ENST00000637397 MMD2Q8IY49 270 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 CCL13Q99616 98 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 LOC102724200A0A096LPH7 203 aaPredicted RBP13.49□□□□□ -0.25
CLN5-218ENST00000637397 FAM157AC9JC47 383 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 WNT9BO14905 357 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 IGLV3-19P01714 112 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
CLN5-218ENST00000637397 TRIP6Q15654 476 aaKnown RBP13.49□□□□□ -0.25
CLN5-218ENST00000637397 C19orf35Q6ZS72 473 aa13.49□□□□□ -0.25
CLN5-218ENST00000637397 STXBP6Q8NFX7 210 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms