RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TGIF2LYQ8IUE0 185 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TGIF2LXQ8IUE1 241 aa3.82□□□□□ -1.8
SCN1A-210ENST00000635776 TDRD6O60522 2096 aaKnown RBP3.82□□□□□ -1.8
SCN1A-210ENST00000635776 MLNRO43193 412 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF205O95201 554 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CGAP01215 116 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 DEFB108BQ8NET1 73 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM140Q9NV12 185 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 A0A1B0GV50 99 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 SEC14L6B5MCN3 397 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 PROB1E7EW31 1015 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 MAS1LP35410 378 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 RPS16P62249 146 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 OR2B11Q5JQS5 317 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CCDC144NLQ6NUI1 221 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 GATAD1Q8WUU5 269 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 RPUSD1Q9UJJ7 312 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 RNF115Q9Y4L5 304 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 IGKV1-6A0A0C4DH72 117 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF98A6NK75 572 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 J3QR06 171 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 S1PR2O95136 353 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CST9LP1Q5W188 147 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 OR8B3Q8NGG8 313 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 OR8B2Q96RD0 313 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 TCF19Q9Y242 345 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 WASHC3Q9Y3C0 194 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 SRP19P09132 144 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 GPX4P36969 197 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 FAM3BP58499 235 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 RBMXL3Q8N7X1 1067 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 PCGF1Q9BSM1 259 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 BET1LQ9NYM9 111 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 K7EQM0 130 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 AP4M1O00189 453 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CELA3BP08861 270 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CHRNB4P30926 498 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 SRP14P37108 136 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 ERVFRD-1P60508 538 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 LCN2P80188 198 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 HLA-DRB5Q30154 266 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF788Q6ZQV5 615 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 OR4C13Q8NGP0 309 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 PARP12Q9H0J9 701 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 LIME1Q9H400 295 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 MIOXQ9UGB7 285 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 TPRP12270 2363 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 A0A1B0GWJ7 208 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 NPBWR1P48145 328 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 ESPL1Q14674 2120 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 POU2AF1Q16633 256 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 THYN1Q9P016 225 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 IGHV3-43A0A0B4J1X8 118 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 A0A1W2PNU3 283 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 PSPNO60542 156 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 OR4A8P0C604 315 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 IGHV3-43DP0DP04 118 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CENPVQ7Z7K6 275 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CLDND2Q8NHS1 167 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 NEU4Q8WWR8 484 aaPredicted RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 COQ2Q96H96 371 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 IL36RNQ9UBH0 155 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 DNAJC13O75165 2243 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 C15orf61A6NNL5 157 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 C3orf80F5H4A9 247 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 TMPRSS2O15393 492 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 CR1LQ2VPA4 569 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 C1QL4Q86Z23 238 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 RNASEH2CQ8TDP1 164 aaKnown RBP3.81□□□□□ -1.8
SCN1A-210ENST00000635776 FAM222BQ8WU58 562 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 ABHD17AQ96GS6 310 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM106BQ9NUM4 274 aa3.81□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF503-AS2A6NEH8 195 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 IGKV1-5P01602 117 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 CRYBA1P05813 215 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 TEX36Q5VZQ5 186 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM88Q6PEY1 159 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 SSX9Q7RTT3 188 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 OR51B2Q9Y5P1 312 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 H0YL77 283 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 DLL1O00548 723 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 GOSR1O95249 250 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 SSTR5P35346 364 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 ERVS71-1P61550 626 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RPL8P62917 257 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 MST1LQ2TV78 715 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM171Q8WVE6 324 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RNASE6Q93091 150 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 FAM210BQ96KR6 192 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 HARBI1Q96MB7 349 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RPRMQ9NS64 109 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 MSRB2Q9Y3D2 182 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 GTF3C1Q12789 2109 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 PPIHO43447 177 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF585BQ52M93 769 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 WDR73Q6P4I2 378 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 HEPN1Q6WQI6 88 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RCC1LQ96I51 464 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 MS4A7Q9GZW8 240 aaPredicted RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 GAR1Q9NY12 217 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms