RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 LSM10Q969L4 123 aaKnown RBP12.09□□□□□ -0.47
UBE3A-220ENST00000630424 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 LOC389332A0A1B0GUA5 103 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 A8MWL6 223 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 PGLYRP1O75594 196 aaPredicted RBP12.08□□□□□ -0.47
UBE3A-220ENST00000630424 DLK1P80370 383 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 TMEM183BQ1AE95 376 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 SPACA3Q8IXA5 215 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 OR1N2Q8NGR9 330 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 MAP1LC3CQ9BXW4 147 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 FAM206AQ9NX38 181 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 PHLDA3Q9Y5J5 127 aa12.08□□□□□ -0.47
UBE3A-220ENST00000630424 MPDU1O75352 247 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 UBE2V2Q15819 145 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 VKORC1L1Q8N0U8 176 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 ZNF502Q8TBZ5 544 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 EEF1AKMT3Q96AZ1 226 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 H3BTX0 84 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 PLA2G10O15496 165 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 GPX1P07203 203 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 SNRPD3P62318 126 aaKnown RBP12.08□□□□□ -0.48
UBE3A-220ENST00000630424 FAM208BQ5VWN6 2430 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 IGHV3-49A0A0A0MS15 119 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 SEC11BP0C7V7 166 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 CLDN18P56856 261 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 CD81P60033 236 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 SNRPEP62304 92 aaKnown RBP12.08□□□□□ -0.48
UBE3A-220ENST00000630424 SERF2P84101 59 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 LYRM7Q5U5X0 104 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 UNQ9370/PRO34162Q6UXP9 181 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 HSD17B13Q7Z5P4 300 aaPredicted RBP12.08□□□□□ -0.48
UBE3A-220ENST00000630424 USF3Q68DE3 2245 aa12.08□□□□□ -0.48
UBE3A-220ENST00000630424 DOCK5Q9H7D0 1870 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 IGKV3OR2-268A0A0C4DH90 116 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 J3QW42 95 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 LINC00470Q9BZP3 86 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 RBKSQ9H477 322 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 IL36RNQ9UBH0 155 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 A0A0G2JMM0 328 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 A0A1W2PPB8 328 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 A0A1W2PRS3 328 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 KIR3DP1A8MWS1 328 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 TSPOP30536 169 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 PEAR1Q5VY43 1037 aaPredicted RBP12.07□□□□□ -0.48
UBE3A-220ENST00000630424 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 GCM2O75603 506 aaPredicted RBP12.07□□□□□ -0.48
UBE3A-220ENST00000630424 IGF2P01344 180 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 VSIG10L2P0DP72 767 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 PACRGQ96M98 296 aaPredicted RBP12.07□□□□□ -0.48
UBE3A-220ENST00000630424 TCF19Q9Y242 345 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 IGLV3-19P01714 112 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 CD1AP06126 327 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 RELQ04864 619 aaPredicted RBP12.07□□□□□ -0.48
UBE3A-220ENST00000630424 NRIP2Q9BQI9 281 aa12.07□□□□□ -0.48
UBE3A-220ENST00000630424 LYRM2Q9NU23 88 aaPredicted RBP12.07□□□□□ -0.48
UBE3A-220ENST00000630424 FAM74A3Q4VXF1 159 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 C1orf100Q5SVJ3 147 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 PQLC2Q6ZP29 291 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 SAXO1Q8IYX7 474 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 FUT9Q9Y231 359 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 C10orf128Q5T292 105 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
UBE3A-220ENST00000630424 ELOVL1Q9BW60 279 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 SCN4AP35499 1836 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 NUTF2P61970 127 aaKnown RBP12.06□□□□□ -0.48
UBE3A-220ENST00000630424 FAM74A4Q5TZK3 123 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 FAM53AQ6NSI3 398 aaPredicted RBP12.06□□□□□ -0.48
UBE3A-220ENST00000630424 NPIPB3Q92617 1050 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 IMMP1LQ96LU5 166 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 HEATR5BQ9P2D3 2071 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 PITX3O75364 302 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 APCSP02743 223 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 BTF3P20290 206 aaKnown RBP12.06□□□□□ -0.48
UBE3A-220ENST00000630424 C9orf106Q8NAJ2 232 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 ANGPTL6Q8NI99 470 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 GPR146Q96CH1 333 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 TNFSF18Q9UNG2 199 aa12.06□□□□□ -0.48
UBE3A-220ENST00000630424 H3BQ15 152 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 PTBP3O95758 552 aaKnown RBP12.05□□□□□ -0.48
UBE3A-220ENST00000630424 HLA-DQB1P01920 261 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 IL4P05112 153 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 HIST1H1AQ02539 215 aaPredicted RBP12.05□□□□□ -0.48
UBE3A-220ENST00000630424 EGR4Q05215 589 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 SGMS2Q8NHU3 365 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 DNAJC4Q9NNZ3 241 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 FAM74A7A6NL05 159 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 ZNF708P17019 499 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 TMEM30BQ3MIR4 351 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 RBM38Q9H0Z9 239 aaKnown RBP12.05□□□□□ -0.48
UBE3A-220ENST00000630424 FBXL15Q9H469 300 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 TMEM218A2RU14 115 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 C7orf77A4D0Y5 90 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 NDUFB4O95168 129 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 HKR1P10072 659 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 CX3CL1P78423 397 aa12.05□□□□□ -0.48
UBE3A-220ENST00000630424 ZXDCQ2QGD7 858 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms