RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	PEMT	Q9UBM1	199 aa		11.94	□□□□□ -0.5
NRXN1-222	ENST00000625672	PLP1	P60201	277 aa		11.94	□□□□□ -0.5
NRXN1-222	ENST00000625672	KIAA0040	Q15053	153 aa		11.94	□□□□□ -0.5
NRXN1-222	ENST00000625672	DEFB121	Q5J5C9	76 aa		11.94	□□□□□ -0.5
NRXN1-222	ENST00000625672	C1orf53	Q5VUE5	145 aa		11.94	□□□□□ -0.5
NRXN1-222	ENST00000625672	FOXD3	Q9UJU5	478 aa	Predicted RBP	11.94	□□□□□ -0.5
NRXN1-222	ENST00000625672	OR4C45	A6NMZ5	311 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	TRBV20OR9-2	A0A075B6H5	130 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	CTDSPL	O15194	276 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	VSIG8	P0DPA2	414 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	FAM209A	Q5JX71	171 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	ZAR1	Q86SH2	424 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672		K7ERU9	68 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	IL4	P05112	153 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	CDCP2	Q5VXM1	449 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	RHOV	Q96L33	236 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	C7orf69	Q9H7B7	122 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672		A0A0G2JLM5	398 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672		A0A1W2PQM1	296 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672		H0Y980	276 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	SLC25A20	O43772	301 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	OTX1	P32242	354 aa	Predicted RBP	11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	ACSF3	Q4G176	576 aa	Predicted RBP	11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	SLIRP	Q9GZT3	109 aa	Known RBP	11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	OR51M1	Q9H341	326 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	CRP	P02741	224 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	VKORC1L1	Q8N0U8	176 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	SSC4D	Q8WTU2	575 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	GAGE10	A6NGK3	116 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	SPATA45	Q537H7	98 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	MIC13	Q5XKP0	118 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672	ST6GAL2	Q96JF0	529 aa		11.93	□□□□□ -0.5
NRXN1-222	ENST00000625672		A0A0U1RQV5	110 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	KLF14	Q8TD94	323 aa	Predicted RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672		M0R381	172 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	ZNF688	P0C7X2	276 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	TRBV7-9	A0A0J9YWB2	115 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	OR51G1	Q8NGK1	321 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	NHS	Q6T4R5	1651 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	DIDO1	Q9BTC0	2240 aa	Known RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	HOGA1	Q86XE5	327 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	PILRB	Q9UKJ0	227 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	ASAH2B	P0C7U1	165 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	NRXN3	Q9Y4C0	1643 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	RBMY1B	A6NDE4	496 aa	Known RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	RBMY1E	A6NEQ0	496 aa	Known RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	ZIC3	O60481	467 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	LEPROTL1	O95214	131 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	RBMY1D	P0C7P1	496 aa	Known RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	RBMY1A1	P0DJD3	496 aa	Known RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	RBMY1C	P0DJD4	496 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	RNASE4	P34096	147 aa	Known RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	NXT2	Q9NPJ8	142 aa	Known RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	DTX4	Q9Y2E6	619 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	C1QA	P02745	245 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	CNTFR	P26992	372 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	TMEM136	Q6ZRR5	245 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	GOLT1A	Q6ZVE7	132 aa		11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.92	□□□□□ -0.5
NRXN1-222	ENST00000625672	TMEM186	Q96B77	213 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672		S4R3C0	116 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	PTP4A3	O75365	173 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	CDK2AP2	O75956	126 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	ARL14EPL	P0DKL9	152 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	RCC1	P18754	421 aa	Predicted RBP	11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	CKAP5	Q14008	2032 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	IGF2	P01344	180 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	TBL2	Q9Y4P3	447 aa	Known RBP	11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	IGKV3D-20	A0A0C4DH25	116 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	HSPB9	Q9BQS6	159 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	NPFFR1	Q9GZQ6	430 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	TMEM160	Q9NX00	188 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672		H3BRM9	83 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	LRRC3B	Q96PB8	259 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	SEMA5B	Q9P283	1151 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	DICER1	Q9UPY3	1922 aa	Known RBP	11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	SERF2	P84101	59 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	RUNX1	Q01196	453 aa		11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	ZNF107	Q9UII5	783 aa	Predicted RBP	11.91	□□□□□ -0.5
NRXN1-222	ENST00000625672	SEC16A	O15027	2179 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	C7orf77	A4D0Y5	90 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	C10orf126	Q8N4M7	172 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	TMEM74B	Q9NUR3	256 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	FAM3B	P58499	235 aa	Predicted RBP	11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	OR10AG1	Q8NH19	301 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	ZNF324B	Q6AW86	544 aa	Predicted RBP	11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	TMEM45B	Q96B21	275 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	KLK13	Q9UKR3	277 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	AHCTF1	Q8WYP5	2266 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	PRR32	B1ATL7	298 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	FOXS1	O43638	330 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	TCF21	O43680	179 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	BCL2	P10415	239 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	CLDND2	Q8NHS1	167 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672		A0A1W2PQF6	199 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	HKR1	P10072	659 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	PEBP1	P30086	187 aa	Known RBP	11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	ASIP	P42127	132 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	OR4D11	Q8NGI4	311 aa		11.9	□□□□□ -0.5
NRXN1-222	ENST00000625672	IGKV1D-33	P01593	117 aa		11.9	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms