RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 HSF4Q9ULV5 492 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 KPTNQ9Y664 436 aa7.57□□□□□ -1.2
HDAC9-229ENST00000622668 E5RGE8 158 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 CGAP01215 116 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 POLR2GP62487 172 aaKnown RBP eCLIP7.56□□□□□ -1.2
HDAC9-229ENST00000622668 GAMTQ14353 236 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 TMEM200BQ69YZ2 307 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 FAM122CQ6P4D5 195 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 SMIM15Q7Z3B0 74 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF645Q8N7E2 425 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 PTX4Q96A99 478 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 MGST1P10620 155 aaKnown RBP7.56□□□□□ -1.2
HDAC9-229ENST00000622668 KLF9Q13886 244 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-229ENST00000622668 GGNBP1Q5YKI7 109 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 LCN15Q6UWW0 184 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 ZDHHC22Q8N966 263 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 LFNGQ8NES3 379 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV3-49A0A0A0MS15 119 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 SYNGR2O43760 224 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 ADAP1O75689 374 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 HTD2P86397 168 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 DHRS2Q13268 280 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 ASPHD2Q6ICH7 369 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 WFDC11Q8NEX6 87 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 PLSCR3Q9NRY6 295 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 TMEM140Q9NV12 185 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 TNCP24821 2201 aa7.56□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV2-26A0A0B4J1V2 119 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 SCAF4O95104 1147 aaKnown RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 IGLV1-44P01699 117 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 RPL12P30050 165 aaKnown RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 HOXA4Q00056 320 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 LIAT1Q6ZQX7 453 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 ANGPTL6Q8NI99 470 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 SFT2D1Q8WV19 159 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 BLNKQ8WV28 456 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 RGP1Q92546 391 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 HELZ2Q9BYK8 2649 aaKnown RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 TMEM14DPA8MWL7 114 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 PSPNO60542 156 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV3-23P01764 117 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV1-8P0DP01 117 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 PAX6P26367 422 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 CCKARP32238 428 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 SLC38A11Q08AI6 406 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 RAB40CQ96S21 281 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 SRRQ9GZT4 340 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 HRH4Q9H3N8 390 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 ELF5Q9UKW6 265 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 TNRC6AQ8NDV7 1962 aaKnown RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 PSMB11A5LHX3 300 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 OR5H14A6NHG9 310 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 NKX2-5P52952 324 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 ANKRD55Q3KP44 614 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 ADAD2Q8NCV1 583 aaKnown RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 FAM110DQ8TAY7 271 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 QTRT1Q9BXR0 403 aaKnown RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 FAM212BQ9NTI7 297 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 VSIG4Q9Y279 399 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 IGHV3OR16-8A0A075B7F1 116 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 NBR2O15453 112 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 KBTBD11O94819 623 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 SFT2D2O95562 160 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 SNRPCP09234 159 aaKnown RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 ACOT6Q3I5F7 207 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-229ENST00000622668 FAM219AQ8IW50 185 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 OR1L6Q8NGR2 347 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 ARPC1AQ92747 370 aa7.55□□□□□ -1.2
HDAC9-229ENST00000622668 HTR2BP41595 481 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 DLX1P56177 255 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 FBXL19-AS1Q494R0 122 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 LYSMD2Q8IV50 215 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 SLIRPQ9GZT3 109 aaKnown RBP7.54□□□□□ -1.2
HDAC9-229ENST00000622668 NAGKQ9UJ70 344 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 TP53BP1Q12888 1972 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-229ENST00000622668 DENND4AQ7Z401 1863 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 MARCH11A6NNE9 402 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF207O43670 478 aaKnown RBP7.54□□□□□ -1.2
HDAC9-229ENST00000622668 CD33P20138 364 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 MFAP4P55083 255 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 HEPN1Q6WQI6 88 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 LYZL2Q7Z4W2 148 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 PPP1R1CQ8WVI7 109 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 RNF114Q9Y508 228 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 A0A1W2PS18 150 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 F8VVB4 439 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 F8VWA3 439 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 PRTN3P24158 256 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 SURF2Q15527 256 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-229ENST00000622668 Q6ZR03 302 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 CD177Q8N6Q3 437 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 EEF1AKMT3Q96AZ1 226 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 ZNF486Q96H40 463 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-229ENST00000622668 METTL26Q96S19 204 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 MMP26Q9NRE1 261 aa7.54□□□□□ -1.2
HDAC9-229ENST00000622668 LSM2Q9Y333 95 aaKnown RBP7.54□□□□□ -1.2
HDAC9-229ENST00000622668 FAM24AA6NFZ4 105 aa7.53□□□□□ -1.2
HDAC9-229ENST00000622668 NDUFB6O95139 128 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms