RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 TCF23Q7RTU1 214 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 C1orf87Q8N0U7 546 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.55□□□□□ -0.56
EPB42-210ENST00000622454 CORO2AQ92828 525 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 LEAP2Q969E1 77 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 S1PR3Q99500 378 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 SMDT1Q9H4I9 107 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 LINC00574Q9H8X3 128 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 KALRNO60229 2985 aa11.55□□□□□ -0.56
EPB42-210ENST00000622454 TRAV38-1A0A0B4J264 116 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 SLC31A2O15432 143 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 ZG16O60844 167 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 KIR2DS2P43631 304 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 TMEM30BQ3MIR4 351 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 CT45A1Q5HYN5 189 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 TMEM88Q6PEY1 159 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 CT45A3Q8NHU0 189 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 OR4C12Q96R67 309 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 RSG1Q9BU20 258 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 ITPR1Q14643 2758 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 NFYBP25208 207 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 RAB2AP61019 212 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 CCL20P78556 96 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 SERF2P84101 59 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 NCMAPQ5T1S8 102 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 UTF1Q5T230 341 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 DHRS7BQ6IAN0 325 aaPredicted RBP11.54□□□□□ -0.56
EPB42-210ENST00000622454 CLRN3Q8NCR9 226 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 SFT2D1Q8WV19 159 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 WDR61Q9GZS3 305 aaKnown RBP11.54□□□□□ -0.56
EPB42-210ENST00000622454 IDI2-AS1Q9NZ38 188 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 KIAA1456Q9P272 454 aa11.54□□□□□ -0.56
EPB42-210ENST00000622454 hADV38S2A0JD32 116 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 CEBPZOSA8MTT3 80 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 SHISA9B4DS77 424 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 HBE1P02100 147 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 ERVK-16P61578 105 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 ATP6V1FQ16864 119 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 AARDQ4LEZ3 155 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 SP5Q6BEB4 398 aaPredicted RBP11.53□□□□□ -0.56
EPB42-210ENST00000622454 DDB2Q92466 427 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 RNASE6Q93091 150 aaKnown RBP11.53□□□□□ -0.56
EPB42-210ENST00000622454 SLC35B3Q9H1N7 401 aa11.53□□□□□ -0.56
EPB42-210ENST00000622454 ATRXP46100 2492 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 SAA2-SAA4A0A096LPE2 208 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 A0A1W2PPE3 182 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 RBFOX3A6NFN3 312 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 OR9G9P0C7N8 305 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.56
EPB42-210ENST00000622454 NQO2P16083 231 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 NDUFB7P17568 137 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 OR10P1Q8NGE3 313 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 PINX1Q96BK5 328 aaKnown RBP11.52□□□□□ -0.56
EPB42-210ENST00000622454 RBMXL1Q96E39 390 aaKnown RBP11.52□□□□□ -0.56
EPB42-210ENST00000622454 QTRT1Q9BXR0 403 aaKnown RBP11.52□□□□□ -0.56
EPB42-210ENST00000622454 LINC00312Q9Y6C7 94 aa11.52□□□□□ -0.56
EPB42-210ENST00000622454 PKDREJQ9NTG1 2253 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 PPIAL4EA0A075B759 164 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 UBE2L5PA0A1B0GUS4 154 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 PPIAL4DF5H284 164 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 TMEM178BH3BS89 294 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 LY86O95711 162 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 PPIAL4FP0DN26 164 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 C1orf229Q6ZS94 237 aaPredicted RBP11.52□□□□□ -0.57
EPB42-210ENST00000622454 SSX9Q7RTT3 188 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 CBLN2Q8IUK8 224 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 DMRTC2Q8IXT2 367 aaPredicted RBP11.52□□□□□ -0.57
EPB42-210ENST00000622454 ZNF439Q8NDP4 499 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 OR4S2Q8NH73 311 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 TAF15Q92804 592 aaKnown RBP eCLIP11.52□□□□□ -0.57
EPB42-210ENST00000622454 RARRES2Q99969 163 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 MS4A5Q9H3V2 200 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 SLC25A10Q9UBX3 287 aaPredicted RBP11.52□□□□□ -0.57
EPB42-210ENST00000622454 PPIAL4AQ9Y536 164 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 RELNP78509 3460 aa11.52□□□□□ -0.57
EPB42-210ENST00000622454 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 E7EQL1 145 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 IFNA17P01571 189 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 CA7P43166 264 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 MRPS11P82912 194 aaKnown RBP11.51□□□□□ -0.57
EPB42-210ENST00000622454 MEF2CQ06413 473 aaPredicted RBP11.51□□□□□ -0.57
EPB42-210ENST00000622454 LYG1Q8N1E2 194 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 OR4A16Q8NH70 328 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 CCL17Q92583 94 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 DYNLRB1Q9NP97 96 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 RPRMQ9NS64 109 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 RPUSD1Q9UJJ7 312 aaKnown RBP11.51□□□□□ -0.57
EPB42-210ENST00000622454 ARFGEF3Q5TH69 2177 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 PMS2P5A8MQ11 134 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 THBS3P49746 956 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 OR2B8PP59922 312 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 LY6DQ14210 128 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 SPINK9Q5DT21 86 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 ZNF251Q9BRH9 671 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 TMEM147Q9BVK8 224 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 GAL3ST2Q9H3Q3 398 aa11.51□□□□□ -0.57
EPB42-210ENST00000622454 TMEM106BQ9NUM4 274 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms