RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 PHLDA3Q9Y5J5 127 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 SBF2Q86WG5 1849 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 IGHV5-10-1A0A0J9YXX1 117 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 LINC01387J3KSC0 135 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 TMEM50AO95807 157 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 GPR183P32249 361 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 NANOS3P60323 173 aaKnown RBP8.55□□□□□ -1.04
COL4A6-210ENST00000621266 CX3CL1P78423 397 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 LCN2P80188 198 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 OR5AN1Q8NGI8 311 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 C16orf92Q96LL3 132 aa8.55□□□□□ -1.04
COL4A6-210ENST00000621266 RP1L1Q8IWN7 2480 aaPredicted RBP8.55□□□□□ -1.04
COL4A6-210ENST00000621266 RNPS1Q15287 305 aaKnown RBP8.54□□□□□ -1.04
COL4A6-210ENST00000621266 FGF11Q92914 225 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 GPR82Q96P67 336 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
COL4A6-210ENST00000621266 INSIG2Q9Y5U4 225 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 ID1P41134 155 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 TCF24Q7RTU0 167 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 C5orf30Q96GV9 206 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 WDYHV1Q96HA8 205 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 SELENOKQ9Y6D0 94 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 CD160O95971 181 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 EFNB1P98172 346 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 APOHP02749 345 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-210ENST00000621266 OR10J6PQ8NGY7 276 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 AICDAQ9GZX7 198 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 NHP2Q9NX24 153 aaKnown RBP8.54□□□□□ -1.04
COL4A6-210ENST00000621266 TRBV20OR9-2A0A075B6H5 130 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 TRAV21A0A0B4J279 112 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 C10orf111Q8N326 155 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 DUSP15Q9H1R2 295 aaPredicted RBP8.54□□□□□ -1.04
COL4A6-210ENST00000621266 CACNA1CQ13936 2221 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 IGHV3OR16-12A0A075B7B8 117 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 MPDU1O75352 247 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 HBBP68871 147 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 FAM74A4Q5TZK3 123 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 OR6X1Q8NH79 312 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 ZPLD1Q8TCW7 415 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 SPSB4Q96A44 273 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
COL4A6-210ENST00000621266 F2RL2O00254 374 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 NDUFS6O75380 124 aaKnown RBP8.53□□□□□ -1.04
COL4A6-210ENST00000621266 HOXB1P14653 301 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-210ENST00000621266 PRDX2P32119 198 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 UCP3P55916 312 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 HIKESHIQ53FT3 197 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 CENPWQ5EE01 88 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 LPAR2Q9HBW0 351 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 S1PR2O95136 353 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 HCP5Q6MZN7 132 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 H0Y980 276 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 SELENOHQ8IZQ5 122 aaKnown RBP8.53□□□□□ -1.04
COL4A6-210ENST00000621266 ZBTB34Q8NCN2 500 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 SP7Q8TDD2 431 aaPredicted RBP8.53□□□□□ -1.04
COL4A6-210ENST00000621266 GDF15Q99988 308 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 A0A1W2PPC1 479 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 PGPEP1LA6NFU8 196 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 SCTP09683 121 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 TMEM108Q6UXF1 575 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 RNASEH2CQ8TDP1 164 aaKnown RBP8.53□□□□□ -1.04
COL4A6-210ENST00000621266 GPR146Q96CH1 333 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 TMEM222Q9H0R3 208 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 TPRX1Q8N7U7 411 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 DYNLRB2Q8TF09 96 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 ZNF257Q9Y2Q1 563 aa8.53□□□□□ -1.04
COL4A6-210ENST00000621266 TBX6O95947 436 aaPredicted RBP8.52□□□□□ -1.04
COL4A6-210ENST00000621266 LOXL3P58215 753 aa8.52□□□□□ -1.04
COL4A6-210ENST00000621266 SUMO2P61956 95 aaKnown RBP8.52□□□□□ -1.04
COL4A6-210ENST00000621266 VAX1Q5SQQ9 334 aa8.52□□□□□ -1.04
COL4A6-210ENST00000621266 FHL5Q5TD97 284 aa8.52□□□□□ -1.04
COL4A6-210ENST00000621266 SCNM1Q9BWG6 230 aa8.52□□□□□ -1.04
COL4A6-210ENST00000621266 GPR132Q9UNW8 380 aa8.52□□□□□ -1.04
COL4A6-210ENST00000621266 MUC21A0A0G2JKD1 596 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 MUC21A0A140T8X8 626 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 PSMB11A5LHX3 300 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 GZMHP20718 246 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 MUC21Q5SSG8 566 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 C1orf185Q5T7R7 199 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 ZFAND6Q6FIF0 208 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 ASCL4Q6XD76 172 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 SDHCQ99643 169 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-210ENST00000621266 CARHSP1Q9Y2V2 147 aaKnown RBP8.52□□□□□ -1.05
COL4A6-210ENST00000621266 A0A1W2PP11 408 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 MMDQ15546 238 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 C10orf35Q96D05 121 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 ZNF714Q96N38 554 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 METTL26Q96S19 204 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 ZNF56Q15929 161 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 VN1R4Q7Z5H5 301 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 TXNDC17Q9BRA2 123 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 SS18L1O75177 396 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-210ENST00000621266 C8orf82Q6P1X6 216 aaPredicted RBP8.52□□□□□ -1.05
COL4A6-210ENST00000621266 PLAC1Q9HBJ0 212 aa8.52□□□□□ -1.05
COL4A6-210ENST00000621266 ZNHIT1O43257 154 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 RAMP1O60894 148 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 PLAURQ03405 335 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 GTSF1LQ9H1H1 148 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 TCFL5Q9UL49 500 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms