RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 FOXF2Q12947 444 aa7.75□□□□□ -1.17
GGA3-222ENST00000621217 FFAR4Q5NUL3 377 aa7.75□□□□□ -1.17
GGA3-222ENST00000621217 C12orf54Q6X4T0 127 aa7.75□□□□□ -1.17
GGA3-222ENST00000621217 BHLHA15Q7RTS1 189 aaPredicted RBP7.75□□□□□ -1.17
GGA3-222ENST00000621217 LIN7CQ9NUP9 197 aaKnown RBP7.75□□□□□ -1.17
GGA3-222ENST00000621217 COLCA2A8K830 154 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 ENSAO43768 121 aaKnown RBP7.74□□□□□ -1.17
GGA3-222ENST00000621217 RPEL1Q2QD12 228 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 ASCL5Q7RTU5 278 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 SRD5A3Q9H8P0 318 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 MGAQ8IWI9 3026 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 DLEU1O43261 78 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 SLC38A11Q08AI6 406 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 ZNF343Q6P1L6 599 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 ZCCHC24Q8N2G6 241 aaKnown RBP7.74□□□□□ -1.17
GGA3-222ENST00000621217 OR10G4Q8NGN3 311 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 OR10G9Q8NGN4 311 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 OR10G7Q8NGN6 311 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 PCGF1Q9BSM1 259 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 OR2D2Q9H210 308 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 GAL3ST2Q9H3Q3 398 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 PROK2Q9HC23 129 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 TAAR3PQ9P1P4 343 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 OR1A1Q9P1Q5 309 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 PSG11Q9UQ72 335 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 FREM2Q5SZK8 3169 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 NDUFS8O00217 210 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 OR7C2O60412 319 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 HPRT1P00492 218 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 WT1P19544 449 aaPredicted RBP7.74□□□□□ -1.17
GGA3-222ENST00000621217 MOGAT3Q86VF5 341 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 MTURNQ8N3F0 131 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 C9orf106Q8NAJ2 232 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 MRPL30Q8TCC3 161 aaKnown RBP7.74□□□□□ -1.17
GGA3-222ENST00000621217 TPPP3Q9BW30 176 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 NGBQ9NPG2 151 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 A0A1W2PPE3 182 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 CRYM-AS1A6NIL9 109 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 PROB1E7EW31 1015 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 CDS2O95674 445 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 LINC00614P0C842 121 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 HLA-GP17693 338 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 RND3P61587 244 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 QRFPP83859 136 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 HOXA4Q00056 320 aaPredicted RBP7.74□□□□□ -1.17
GGA3-222ENST00000621217 PMCHL1Q16048 86 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 MAJINQ3KP22 176 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 ZNF818PQ6ZRF7 136 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 POC1AQ8NBT0 407 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 MISP3Q96FF7 219 aa7.74□□□□□ -1.17
GGA3-222ENST00000621217 NUDT16L1Q9BRJ7 211 aaKnown RBP7.74□□□□□ -1.17
GGA3-222ENST00000621217 ARFGEF3Q5TH69 2177 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 hCG_38984A0A1B0GV85 526 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 SNURFLB1AK76 121 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 TRDCB7Z8K6 153 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 RPL36A-HNRNPH2H7BZ11 118 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 DANCRP0C864 163 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 PPP1CCP36873 323 aaKnown RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 SRP14P37108 136 aaKnown RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 CDC34P49427 236 aaPredicted RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 UCP2P55851 309 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 NHLH1Q02575 133 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 SGMS2Q8NHU3 365 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 C14orf144Q96I85 54 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 HS3ST6Q96QI5 342 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 ALKBH7Q9BT30 221 aaPredicted RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 MALRD1Q5VYJ5 2156 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 DEDDO75618 318 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 GYPAP02724 150 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 TDGF1P13385 188 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 PPOXP50336 477 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 JOSD1Q15040 202 aaPredicted RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 Q5PR19 223 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 PLA2G2CQ5R387 149 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 FAM201AQ5SY85 155 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 FA2HQ7L5A8 372 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 RBMXL3Q8N7X1 1067 aaKnown RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 GALNT14Q96FL9 552 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 WDR61Q9GZS3 305 aaKnown RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 RIMS4Q9H426 269 aaPredicted RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 RAXQ9Y2V3 346 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 A0A1W2PRD5 423 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 A0A1W2PRF3 423 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 A0A1W2PRM7 423 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 C11orf94C9JXX5 98 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 WNT9BO14905 357 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 S100A7P31151 101 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 RELQ04864 619 aaPredicted RBP7.73□□□□□ -1.17
GGA3-222ENST00000621217 PRAMEF5Q5TYX0 476 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 BPIFA4PQ86YQ2 179 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 NHLRC2Q8NBF2 726 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 GALMQ96C23 342 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 WDYHV1Q96HA8 205 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 RSG1Q9BU20 258 aa7.73□□□□□ -1.17
GGA3-222ENST00000621217 YLPM1P49750 1951 aaKnown RBP7.72□□□□□ -1.17
GGA3-222ENST00000621217 SPINT2O43291 252 aa7.72□□□□□ -1.17
GGA3-222ENST00000621217 LILRA1O75019 489 aa7.72□□□□□ -1.17
GGA3-222ENST00000621217 PMELP40967 661 aa7.72□□□□□ -1.17
GGA3-222ENST00000621217 KLF3P57682 345 aaPredicted RBP7.72□□□□□ -1.17
GGA3-222ENST00000621217 CEACAM21Q3KPI0 293 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms