RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 TRDCB7Z8K6 153 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 C9JQL5 133 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 DNPH1O43598 174 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 DEDDO75618 318 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 CTSDP07339 412 aaPredicted RBP7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 SULT1A2P50226 295 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 SURF2Q15527 256 aaPredicted RBP7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 LIAT1Q6ZQX7 453 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 SMIM8Q96KF7 97 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 PLEKHA2Q9HB19 425 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 SEMA5BQ9P283 1151 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 USP24Q9UPU5 2620 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 WDFY3Q8IZQ1 3526 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 A0A0U1RQV5 110 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 A0A1W2PRX2 142 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 CEACAM18A8MTB9 384 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 SEC14L6B5MCN3 397 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 UMODP07911 640 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 SMIM17P0DL12 118 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 KCNMB1Q16558 191 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 OR13D1Q8NGV5 346 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 ANAPC10Q9UM13 185 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 HBZP02008 142 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 CD59P13987 128 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 SNRPEP62304 92 aaKnown RBP7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 UBE2L3P68036 154 aaKnown RBP7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 HIST3H3Q16695 136 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 DYNLRB2Q8TF09 96 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 Q96M66 194 aa7.05□□□□□ -1.28
PTPDC1-204ENST00000620992 LY6HO94772 140 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 MBPP02686 304 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 RAB7AP51149 207 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 FOXG1P55316 489 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 TCTAP57738 103 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 LOXL3P58215 753 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 OR4F17Q8NGA8 305 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 RNF122Q9H9V4 155 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 WSB1Q9Y6I7 421 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 LRRC3CA6NJW4 275 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 J3QR06 171 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 ETV2O00321 342 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 SYNGR2O43760 224 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 OR2H2O95918 312 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 ACP1P24666 158 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 SSTR5P35346 364 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 NHLH2Q02577 135 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 RSPO1Q2MKA7 263 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 OR4P4Q8NGL7 312 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 LIME1Q9H400 295 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 ASCL3Q9NQ33 180 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 IGLV3-32A0A0A0MS00 114 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 FCGR3AP08637 254 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 CNN1P51911 297 aaKnown RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 RANP62826 216 aaKnown RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 FADS6Q8N9I5 356 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 DTD1Q8TEA8 209 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 TM2D1Q9BX74 207 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 C1RLQ9NZP8 487 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 WASHC3Q9Y3C0 194 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 MAP1LC3B2A6NCE7 125 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 OOEPA6NGQ2 149 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 ZNF207O43670 478 aaKnown RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 CECR9P0C854 216 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 LYL1P12980 280 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 SLC35B1P78383 322 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 RUNX1Q01196 453 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 GUK1Q16774 197 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 MPV17LQ2QL34 196 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 ZNF705AQ6ZN79 300 aaPredicted RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 MOB1BQ7L9L4 216 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 PNKDQ8N490 385 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 C9orf106Q8NAJ2 232 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 OR4B1Q8NGF8 309 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 OR52M1Q8NGK5 317 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 NABP1Q96AH0 204 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 MARS2Q96GW9 593 aaKnown RBP7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 MAP1LC3BQ9GZQ8 125 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 SH3BGRL3Q9H299 93 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 DEPPQ9NTK1 212 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 TMED3Q9Y3Q3 217 aa7.04□□□□□ -1.28
PTPDC1-204ENST00000620992 ACANP16112 2415 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 CELSR3Q9NYQ7 3312 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 PPIAL4CA0A0B4J2A2 164 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 PPP1R2P9O14990 202 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 RHBDL1O75783 438 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 PPIAL4GP0DN37 164 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 BSPH1Q075Z2 132 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 PSG5Q15238 335 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 AWAT1Q58HT5 328 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 NCR3LG1Q68D85 454 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 FAM216BQ8N7L0 139 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 SSC4DQ8WTU2 575 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 ZNF714Q96N38 554 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 OR51I2Q9H344 312 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 KPTNQ9Y664 436 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 ORM1P02763 201 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 GAPDHP04406 335 aaKnown RBP7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 DYNLT3P51808 116 aa7.03□□□□□ -1.28
PTPDC1-204ENST00000620992 ZNF137PP52743 207 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms