RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	IRF2	P14316	349 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	EGR1	P18146	543 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	PPP1CB	P62140	327 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	GAGE1	Q13065	139 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	FFAR4	Q5NUL3	377 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644		Q6P435	159 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	NANOS1	Q8WY41	292 aa	Known RBP	12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	ANAPC16	Q96DE5	110 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	MS4A10	Q96PG2	267 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	TBX15	Q96SF7	602 aa		12.17	□□□□□ -0.46
SMTN-223	ENST00000619644	ZG16	O60844	167 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	GYPA	P02724	150 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	TYMS	P04818	313 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	EDDM3A	Q14507	147 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	CNEP1R1	Q8N9A8	125 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	OR10G9	Q8NGN4	311 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	OR10G7	Q8NGN6	311 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	SLC25A40	Q8TBP6	338 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	LSM10	Q969L4	123 aa	Known RBP	12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	PINX1	Q96BK5	328 aa	Known RBP	12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	GALM	Q96C23	342 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	WDYHV1	Q96HA8	205 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	ARRDC1-AS1	Q9H2J1	176 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	POLDIP2	Q9Y2S7	368 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	TMEM250	H0YL14	139 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	S1PR2	O95136	353 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	LINC00596	Q86U02	117 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	BOD1L1	Q8NFC6	3051 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	NUPR1	O60356	82 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	PSPN	O60542	156 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	SRP14	P37108	136 aa	Known RBP	12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	TFF3	Q07654	80 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	CST9LP1	Q5W188	147 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	ACSM6	Q6P461	480 aa		12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	MRPS18C	Q9Y3D5	142 aa	Known RBP	12.16	□□□□□ -0.46
SMTN-223	ENST00000619644	AGFG2	O95081	481 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	HAND1	O96004	215 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	CRYAA	P02489	173 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	IL3RA	P26951	378 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	RPL30	P62888	115 aa	Known RBP	12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	MRPL49	Q13405	166 aa	Known RBP	12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	FBXW9	Q5XUX1	488 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	ZNF497	Q6ZNH5	498 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	OR10P1	Q8NGE3	313 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	CAD	P27708	2225 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644		A0A0U1RQK1	487 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	PAGE4	O60829	102 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	CD33	P20138	364 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	CHRNA7	P36544	502 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	MSMO1	Q15800	293 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	FAM78B	Q5VT40	261 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	DIRC2	Q96SL1	478 aa		12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	HEATR1	Q9H583	2144 aa	Known RBP	12.15	□□□□□ -0.46
SMTN-223	ENST00000619644	CRYAB	P02511	175 aa	Known RBP	12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	LINC00614	P0C842	121 aa		12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	FABP6	P51161	128 aa		12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	KCNIP4	Q6PIL6	250 aa		12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	H2BFWT	Q7Z2G1	175 aa		12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	PKIB	Q9C010	78 aa		12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	LPAR2	Q9HBW0	351 aa		12.15	□□□□□ -0.47
SMTN-223	ENST00000619644	PIGBOS1	A0A0B4J2F0	54 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	ODAM	A1E959	279 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	RNF212B	A8MTL3	300 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	C17orf98	A8MV24	154 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	HNF1A	P20823	631 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	MRPS11	P82912	194 aa	Known RBP	12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	PRAMEF6	Q5VXH4	476 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	UBALD2	Q8IYN6	164 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	CDX2	Q99626	313 aa	Predicted RBP	12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	TMEM204	Q9BSN7	226 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	TRAPPC1	Q9Y5R8	145 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	GCH1	P30793	250 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	SSTR5	P35346	364 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	TOMM20L	Q6UXN7	152 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	MOB1B	Q7L9L4	216 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	C1orf210	Q8IVY1	113 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	DTD1	Q8TEA8	209 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	MSL2	Q9HCI7	577 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	ZFHX4	Q86UP3	3567 aa		12.14	□□□□□ -0.47
SMTN-223	ENST00000619644	C12orf77	C9JDV5	145 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	KLRC4-KLRK1	H3BQV0	150 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	SP1	P08047	785 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	SLC25A6	P12236	298 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	RPL15	P61313	204 aa	Known RBP	12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	BATF	Q16520	125 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	TDRG1	Q3Y452	100 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	PARD6A	Q9NPB6	346 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	PSG11	Q9UQ72	335 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	EP300	Q09472	2414 aa	Predicted RBP	12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	ZNF320	A2RRD8	509 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	HBZ	P02008	142 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	BRS3	P32247	399 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	DCTN5	Q9BTE1	182 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	EDDM3B	P56851	147 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	LCN2	P80188	198 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	CATR1	Q13166	79 aa		12.13	□□□□□ -0.47
SMTN-223	ENST00000619644	DMRTA1	Q5VZB9	504 aa		12.13	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms