RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 DCAF16Q9NXF7 216 aa12.98□□□□□ -0.33
NR1H3-235ENST00000616973 TIMM9Q9Y5J7 89 aa12.98□□□□□ -0.33
NR1H3-235ENST00000616973 DOCK11Q5JSL3 2073 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 hADV38S2A0JD32 116 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 RBFOX3A6NFN3 312 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 GPR37O15354 613 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 OR9G9P0C7N8 305 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 THBS3P49746 956 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 CCL20P78556 96 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-235ENST00000616973 DMRTC2Q8IXT2 367 aaPredicted RBP12.97□□□□□ -0.33
NR1H3-235ENST00000616973 TAF15Q92804 592 aaKnown RBP eCLIP12.97□□□□□ -0.33
NR1H3-235ENST00000616973 RNASE6Q93091 150 aaKnown RBP12.97□□□□□ -0.33
NR1H3-235ENST00000616973 ZNF251Q9BRH9 671 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 RSG1Q9BU20 258 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 SLC35B3Q9H1N7 401 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 SAP30LQ9HAJ7 183 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 LINC00312Q9Y6C7 94 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 PTPRQQ9UMZ3 2332 aa12.97□□□□□ -0.33
NR1H3-235ENST00000616973 TRGV8A0A0C4DH27 118 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 TMEM178BH3BS89 294 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 NQO2P16083 231 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 ATF4P18848 351 aaPredicted RBP12.96□□□□□ -0.33
NR1H3-235ENST00000616973 CA7P43166 264 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 ERVK-16P61578 105 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 FBXL19-AS1Q494R0 122 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 PINX1Q96BK5 328 aaKnown RBP12.96□□□□□ -0.33
NR1H3-235ENST00000616973 TMEM147Q9BVK8 224 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 RAXQ9Y2V3 346 aa12.96□□□□□ -0.33
NR1H3-235ENST00000616973 YLPM1P49750 1951 aaKnown RBP12.96□□□□□ -0.33
NR1H3-235ENST00000616973 TET2Q6N021 2002 aaPredicted RBP12.96□□□□□ -0.34
NR1H3-235ENST00000616973 PPIAL4EA0A075B759 164 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 CEBPZOSA8MTT3 80 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 PPIAL4DF5H284 164 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 RBMXL2O75526 392 aaKnown RBP12.96□□□□□ -0.34
NR1H3-235ENST00000616973 PPIAL4FP0DN26 164 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 GNB2P62879 340 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 UTF1Q5T230 341 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 C1orf229Q6ZS94 237 aaPredicted RBP12.96□□□□□ -0.34
NR1H3-235ENST00000616973 OR10P1Q8NGE3 313 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 OR4S2Q8NH73 311 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 MBD3L1Q8WWY6 194 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 ZDHHC16Q969W1 377 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 QTRT1Q9BXR0 403 aaKnown RBP12.96□□□□□ -0.34
NR1H3-235ENST00000616973 RPUSD1Q9UJJ7 312 aaKnown RBP12.96□□□□□ -0.34
NR1H3-235ENST00000616973 PPIAL4AQ9Y536 164 aa12.96□□□□□ -0.34
NR1H3-235ENST00000616973 BOD1L1Q8NFC6 3051 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 SAA2-SAA4A0A096LPE2 208 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 E7EQL1 145 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 TNFRSF13BO14836 293 aaPredicted RBP12.95□□□□□ -0.34
NR1H3-235ENST00000616973 TMPRSS2O15393 492 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 IGHV3-7P01780 117 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 SAA2P0DJI9 122 aaPredicted RBP12.95□□□□□ -0.34
NR1H3-235ENST00000616973 SPCS3P61009 180 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 MRPS11P82912 194 aaKnown RBP12.95□□□□□ -0.34
NR1H3-235ENST00000616973 KLRB1Q12918 225 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 EFNB3Q15768 340 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 VWC2Q2TAL6 325 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 ZNF506Q5JVG8 444 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 PRAMEF5Q5TYX0 476 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 OR8G2PQ6IF36 304 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 SFT2D1Q8WV19 159 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 MS4A5Q9H3V2 200 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 RPRMQ9NS64 109 aa12.95□□□□□ -0.34
NR1H3-235ENST00000616973 SLC25A10Q9UBX3 287 aaPredicted RBP12.95□□□□□ -0.34
NR1H3-235ENST00000616973 ATXN7O15265 892 aaPredicted RBP12.94□□□□□ -0.34
NR1H3-235ENST00000616973 TMEM41BQ5BJD5 291 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 TMEM88Q6PEY1 159 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 SLC25A48Q6ZT89 311 aaKnown RBP12.94□□□□□ -0.34
NR1H3-235ENST00000616973 ZCCHC24Q8N2G6 241 aaKnown RBP12.94□□□□□ -0.34
NR1H3-235ENST00000616973 ST6GALNAC3Q8NDV1 305 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 OR4A16Q8NH70 328 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 LEAP2Q969E1 77 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 RARRES2Q99969 163 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 A0A1B0GV50 99 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 NFYBP25208 207 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 APOBEC3AP31941 199 aaPredicted RBP12.94□□□□□ -0.34
NR1H3-235ENST00000616973 RELBQ01201 579 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 ZNF429Q86V71 674 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 CBLN2Q8IUK8 224 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 GAL3ST2Q9H3Q3 398 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 UNKLQ9H9P5 680 aaKnown RBP12.94□□□□□ -0.34
NR1H3-235ENST00000616973 TMEM106BQ9NUM4 274 aa12.94□□□□□ -0.34
NR1H3-235ENST00000616973 PCNX1Q96RV3 2341 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 A0A1W2PPE3 182 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 HSPB1P04792 205 aaKnown RBP12.93□□□□□ -0.34
NR1H3-235ENST00000616973 ARG1P05089 322 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 NDUFB7P17568 137 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 POU2AF1Q16633 256 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 LYG1Q8N1E2 194 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 CLDND2Q8NHS1 167 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
NR1H3-235ENST00000616973 C15orf62A8K5M9 175 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 MMP23AO75900 390 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 IFNA17P01571 189 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 CD3EP07766 207 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 DAOP14920 347 aa12.92□□□□□ -0.34
NR1H3-235ENST00000616973 MDKP21741 143 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms