RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 HIST1H2BOP23527 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST1H2BBP33778 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST1H2BDP58876 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 LINC00205P59089 165 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST1H2BCP62807 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST2H2BEQ16778 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 CD300LFQ8TDQ1 290 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 WFDC12Q8WWY7 111 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST1H2BHQ93079 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 GALMQ96C23 342 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 NUDT11Q96G61 164 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST1H2BNQ99877 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST1H2BMQ99879 126 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 POMT1Q9Y6A1 747 aa13.01□□□□□ -0.33
SEMA3B-212ENST00000616701 C1QTNF9BB2RNN3 333 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 C16orf97H3BN30 126 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 GZMBP10144 247 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 S100GP29377 79 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 DRAM1Q8N682 238 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 OR2D2Q9H210 308 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 CHD8Q9HCK8 2581 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 USF3Q68DE3 2245 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 IGKV1-39P01597 117 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 IGKV1D-39P04432 117 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 NMSQ5H8A3 153 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 LEMD1Q68G75 181 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 SLC35E4Q6ICL7 350 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 DUX4L9Q6RFH8 374 aaPredicted RBP13□□□□□ -0.33
SEMA3B-212ENST00000616701 SLC24A4Q8NFF2 622 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 OR5D13Q8NGL4 314 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 GPR146Q96CH1 333 aa13□□□□□ -0.33
SEMA3B-212ENST00000616701 IRF2P14316 349 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 RFNGQ9Y644 331 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 MED19A0JLT2 244 aaPredicted RBP12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 OOEPA6NGQ2 149 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 SRRM5B3KS81 715 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 H3BP45 60 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 VDAC1P21796 283 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 Q6ZRM9 215 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 MRGPRGQ86SM5 289 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 C5orf30Q96GV9 206 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 PLEKHA2Q9HB19 425 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 POLEQ07864 2286 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 NPIPB11E5RHQ5 1161 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 GPR137BO60478 399 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 OR2C1O95371 312 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 CD5P06127 495 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 LPAR6P43657 344 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 EDDM3BP56851 147 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 ABHD14BQ96IU4 210 aa12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 SEPSECSQ9HD40 501 aaKnown RBP12.99□□□□□ -0.33
SEMA3B-212ENST00000616701 DPRXA6NFQ7 191 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 A6NJY4 79 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 TMEM50AO95807 157 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 DSCAMO60469 2012 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 TRGV8A0A0C4DH27 118 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 IGSF23A1L1A6 192 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 M0QZ24 198 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 CST7O76096 145 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 IGHV1-46P01743 117 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 THBDP07204 575 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 TNFAIP6P98066 277 aaPredicted RBP12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 BSPH1Q075Z2 132 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 MZT1Q08AG7 82 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 HNF4GQ14541 408 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 ZNF343Q6P1L6 599 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 TMEM217Q8N7C4 229 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 HSD17B11Q8NBQ5 300 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 OR5R1Q8NH85 324 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 PRR7Q8TB68 274 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 NINJ1Q92982 152 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 SMIM8Q96KF7 97 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 SPIN2AQ99865 258 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 HIST1H2BLQ99880 126 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 SPIN2BQ9BPZ2 258 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 NCOR2Q9Y618 2525 aa12.98□□□□□ -0.33
SEMA3B-212ENST00000616701 IGLV3-9A0A075B6K5 115 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 C20orf202A1L168 122 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 ZNF727A8MUV8 499 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 FAM157AC9JC47 383 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 TAAR5O14804 337 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 CHST1O43916 411 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 RAMP3O60896 148 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 ZNF737O75373 536 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 TRGC2P03986 189 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 OR4A8P0C604 315 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 CCL8P80075 99 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 EWSR1Q01844 656 aaKnown RBP eCLIP12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 ZNF585BQ52M93 769 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 C1orf174Q8IYL3 243 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 M0QZK8 103 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 P2RY1P47900 373 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 SELENOVP59797 346 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 RPL30P62888 115 aaKnown RBP12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 VAMP2P63027 116 aa12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 ZNF816Q0VGE8 651 aaPredicted RBP12.97□□□□□ -0.33
SEMA3B-212ENST00000616701 OR2C3Q8N628 320 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms