RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ACP7	Q6ZNF0	438 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF429	Q86V71	674 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	OR13A1	Q8NGR1	328 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RBMXL1	Q96E39	390 aa	Known RBP	11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	C5orf30	Q96GV9	206 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SPX	Q9BT56	116 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF665	Q9H7R5	613 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	KIAA1456	Q9P272	454 aa		11.64	□□□□□ -0.55
CACNA1C-231	ENST00000616390	IGHV3OR15-7	A0A075B7D8	119 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	TRAV17	A0A0B4J275	112 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	TSTD3	H0UI37	97 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	IGKV3-15	P01624	115 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	IGHG3	P01860	377 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SRP19	P09132	144 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF83	P51522	516 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RAB11A	P62491	216 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	FABP9	Q0Z7S8	132 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	NCMAP	Q5T1S8	102 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF343	Q6P1L6	599 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SHISA2	Q6UWI4	295 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SSX7	Q7RTT5	188 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	LRP11	Q86VZ4	500 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	LSM10	Q969L4	123 aa	Known RBP	11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SARAF	Q96BY9	339 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RAB39B	Q96DA2	213 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	OR4C12	Q96R67	309 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	TAAR6	Q96RI8	345 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CXXC4	Q9H2H0	198 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PSG11	Q9UQ72	335 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ACACA	Q13085	2346 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SOX15	O60248	233 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	MT-ND4L	P03901	98 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF718	Q3SXZ3	478 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	BHLHA15	Q7RTS1	189 aa	Predicted RBP	11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF645	Q8N7E2	425 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	LRRC29	Q8WV35	223 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZDHHC16	Q969W1	377 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RBKS	Q9H477	322 aa		11.63	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ADGRG4	Q8IZF6	3080 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	OOEP	A6NGQ2	149 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	NPIPB11	E5RHQ5	1161 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	HIST1H1B	P16401	226 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RAB5A	P20339	215 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RPRML	Q8N4K4	120 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF525	Q8N782	197 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RCC1L	Q96I51	464 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF48	Q96MX3	618 aa	Predicted RBP	11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	IGHV1-18	A0A0C4DH31	117 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PGPEP1L	A6NFU8	196 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RPS23	P62266	143 aa	Known RBP	11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	DLK1	P80370	383 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF787	Q6DD87	383 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZGRF1	Q86YA3	2104 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CLDND2	Q8NHS1	167 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CSTL1	Q9H114	145 aa		11.62	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PPBP	P02775	128 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RPS10	P46783	165 aa	Known RBP	11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	HBG1	P69891	147 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	HBG2	P69892	147 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SPRN	Q5BIV9	151 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PROCR	Q9UNN8	238 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	KALRN	O60229	2985 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	IGHV2OR16-5	A0A0B4J2B6	119 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390		M0R1B8	84 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZG16	O60844	167 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SLC38A11	Q08AI6	406 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RHEB	Q15382	184 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ZNF726P1	Q15940	193 aa		11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ACSF3	Q4G176	576 aa	Predicted RBP	11.61	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ODAM	A1E959	279 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CBY3	A6NI87	242 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	LINC00473	A8K010	186 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	RNF212B	A8MTL3	300 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PRR33	A8MZF0	331 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	AQP7	O14520	342 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CRYGC	P07315	174 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SLC25A6	P12236	298 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	NQO2	P16083	231 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ADIPOQ	Q15848	244 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PYY3	Q5JQD4	70 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	FAM201A	Q5SY85	155 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	PIP4P1	Q86T03	277 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CORO2A	Q92828	525 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	STARD4	Q96DR4	205 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	HES4	Q9HCC6	221 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	ANKRD11	Q6UB99	2663 aa	Predicted RBP	11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	DEFA4	P12838	97 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	EGR1	P18146	543 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	EDDM3B	P56851	147 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CD177	Q8N6Q3	437 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	DKK4	Q9UBT3	224 aa		11.6	□□□□□ -0.55
CACNA1C-231	ENST00000616390	MKRN2OS	H3BPM6	223 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	TNFSF13	O75888	250 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	HBE1	P02100	147 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CEACAM1	P13688	526 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	COX5A	P20674	150 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	CD200	P41217	278 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	BRWD1-AS2	P59051	145 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SMIM21	Q3B7S5	101 aa		11.59	□□□□□ -0.55
CACNA1C-231	ENST00000616390	SLC35E4	Q6ICL7	350 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms