RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 NEU1Q99519 415 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 IL36BQ9NZH7 164 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 K7N7A8 449 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 NPBWR2P48146 333 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 SOX8P57073 446 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 C1QL2Q7Z5L3 287 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 ZNF430Q9H8G1 570 aaPredicted RBP16.16■□□□□ 0.18
SPAST-203ENST00000615843 A0A1W2PRD5 423 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 A0A1W2PRF3 423 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 A0A1W2PRM7 423 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 DLL1O00548 723 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 PKIBQ9C010 78 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
SPAST-203ENST00000615843 SPRED2Q7Z698 418 aa16.15■□□□□ 0.18
SPAST-203ENST00000615843 WDR54Q9H977 334 aa16.15■□□□□ 0.18
SPAST-203ENST00000615843 HSPE1P61604 102 aaKnown RBP16.15■□□□□ 0.18
SPAST-203ENST00000615843 ERASQ7Z444 233 aa16.15■□□□□ 0.18
SPAST-203ENST00000615843 UBALD2Q8IYN6 164 aa16.15■□□□□ 0.18
SPAST-203ENST00000615843 AKIRIN1Q9H9L7 192 aaPredicted RBP16.15■□□□□ 0.18
SPAST-203ENST00000615843 ZNF501Q96CX3 271 aaPredicted RBP16.15■□□□□ 0.18
SPAST-203ENST00000615843 COLCA2A8K830 154 aa16.15■□□□□ 0.18
SPAST-203ENST00000615843 ARF6P62330 175 aa16.15■□□□□ 0.18
SPAST-203ENST00000615843 RPL31P62899 125 aaKnown RBP16.15■□□□□ 0.18
SPAST-203ENST00000615843 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
SPAST-203ENST00000615843 IGHV5-10-1A0A0J9YXX1 117 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 ZIC3O60481 467 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 ALKBH7Q9BT30 221 aaPredicted RBP16.14■□□□□ 0.17
SPAST-203ENST00000615843 TM2D1Q9BX74 207 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 REG4Q9BYZ8 158 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 A0A1B0GV72 72 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 H0YIZ8 118 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 SLC17A3O00476 420 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 MPV17P39210 176 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 MTURNQ8N3F0 131 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 NPIPB13A6NJU9 1138 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 NPIPB4C9JG80 1138 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 ZNF658BQ4V348 819 aaPredicted RBP16.14■□□□□ 0.17
SPAST-203ENST00000615843 NPCDR1Q9BY65 106 aa16.14■□□□□ 0.17
SPAST-203ENST00000615843 TMEM229AB2RXF0 380 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 LIPFP07098 398 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 ICAM4Q14773 271 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 ABHD12Q8N2K0 398 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 DRAM1Q8N682 238 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 TMEM170AQ8WVE7 144 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 NABP2Q9BQ15 211 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 CALHM1Q8IU99 346 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 STPG3Q8N7X2 389 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 SFXN3Q9BWM7 321 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 TCF19Q9Y242 345 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 A1L4Q6 167 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 NUDT3O95989 172 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 RPL27AP46776 148 aaKnown RBP16.13■□□□□ 0.17
SPAST-203ENST00000615843 TFF2Q03403 129 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 P2RY6Q15077 328 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 AREGP15514 252 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 JOSD1Q15040 202 aaPredicted RBP16.13■□□□□ 0.17
SPAST-203ENST00000615843 HEPN1Q6WQI6 88 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 SRSF12Q8WXF0 261 aaKnown RBP16.13■□□□□ 0.17
SPAST-203ENST00000615843 MAP1LC3AQ9H492 121 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 LAMTOR2Q9Y2Q5 125 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 ATG2BQ96BY7 2078 aa16.13■□□□□ 0.17
SPAST-203ENST00000615843 IGHV4-34P06331 123 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 RPL8P62917 257 aaKnown RBP16.12■□□□□ 0.17
SPAST-203ENST00000615843 GCSAMQ8N6F7 178 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 QSER1Q2KHR3 1735 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 LOC390937A0A1W2PQ73 354 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 RND2P52198 227 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.12■□□□□ 0.17
SPAST-203ENST00000615843 C19orf24Q9BVV8 132 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 HES7Q9BYE0 225 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 H7C2G1 150 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 UCP1P25874 307 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 CA7P43166 264 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 TNFRSF19Q9NS68 423 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 HBBP68871 147 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 ZNF826PQ6ZT77 177 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 SMIM13P0DJ93 91 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 UCP2P55851 309 aa16.12■□□□□ 0.17
SPAST-203ENST00000615843 RPL23P62829 140 aaKnown RBP16.12■□□□□ 0.17
SPAST-203ENST00000615843 FOXA3P55318 350 aaPredicted RBP16.11■□□□□ 0.17
SPAST-203ENST00000615843 MMDQ15546 238 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 SGK494Q96LW2 274 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 CLEC1BQ9P126 229 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 RRHO14718 337 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 IGFBP3P17936 291 aaPredicted RBP16.11■□□□□ 0.17
SPAST-203ENST00000615843 IGLV3-21P80748 117 aaPredicted RBP16.11■□□□□ 0.17
SPAST-203ENST00000615843 RBPMS2Q6ZRY4 209 aaKnown RBP16.11■□□□□ 0.17
SPAST-203ENST00000615843 ASCL5Q7RTU5 278 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 KCNS1Q96KK3 526 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 TMUB1Q9BVT8 246 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 ST6GALNAC6Q969X2 333 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 SMOC1Q9H4F8 434 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 SLC25A10Q9UBX3 287 aaPredicted RBP16.11■□□□□ 0.17
SPAST-203ENST00000615843 CTSBP07858 339 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 PRDM14Q9GZV8 571 aa16.11■□□□□ 0.17
SPAST-203ENST00000615843 C17orf51A8MQB3 221 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 HCP5Q6MZN7 132 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 SLC22A18ASQ8N1D0 253 aa16.1■□□□□ 0.17
SPAST-203ENST00000615843 HIST1H2BLQ99880 126 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms