RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 QTRT1Q9BXR0 403 aaKnown RBP7.46□□□□□ -1.22
VPS11-206ENST00000614944 MAP1LC3BQ9GZQ8 125 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 ONECUT1Q9UBC0 465 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 MTFP1Q9UDX5 166 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 HHLA2Q9UM44 414 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 LAMP3Q9UQV4 416 aa7.46□□□□□ -1.22
VPS11-206ENST00000614944 AHCTF1Q8WYP5 2266 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 ZNF207O43670 478 aaKnown RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 CLDN1O95832 211 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 IGFBP3P17936 291 aaPredicted RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 KIR2DL2P43627 348 aaPredicted RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 PDLIM3Q53GG5 364 aaPredicted RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 ZBTB34Q8NCN2 500 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 RBM24Q9BX46 236 aaKnown RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 OR2H1Q9GZK4 316 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 C1QTNF9BB2RNN3 333 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 CSTBP04080 98 aaKnown RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 DANCRP0C864 163 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 WDFY3Q8IZQ1 3526 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 ZFHX2Q9C0A1 2572 aaPredicted RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 RBFOX3A6NFN3 312 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 CDAP32320 146 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 TAS2R20P59543 309 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 TMEM128Q5BJH2 165 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 SPATA31B1PQ5VZV4 182 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 SEM1Q6ZVN7 128 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.45□□□□□ -1.22
VPS11-206ENST00000614944 C9orf106Q8NAJ2 232 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 OR1F12Q8NHA8 337 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 CMTM2Q8TAZ6 248 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 TRIB1Q96RU8 372 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 NMES1Q9C002 83 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 HSPB8Q9UJY1 196 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 TRAPPC2LQ9UL33 140 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 FAM215AQ9Y5M1 114 aa7.45□□□□□ -1.22
VPS11-206ENST00000614944 A0A1W2PR80 420 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 B5MCH6 92 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 SRP19P09132 144 aaKnown RBP7.44□□□□□ -1.22
VPS11-206ENST00000614944 CDKN1AP38936 164 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 TGFBR3Q03167 851 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 PNRC1Q12796 327 aaPredicted RBP7.44□□□□□ -1.22
VPS11-206ENST00000614944 RSPO1Q2MKA7 263 aaPredicted RBP7.44□□□□□ -1.22
VPS11-206ENST00000614944 TMEM217Q8N7C4 229 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 SYNPRQ8TBG9 265 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 PTH2Q96A98 100 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 BTF3L4Q96K17 158 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 C1QTNF5Q9BXJ0 243 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 PBOV1Q9GZY1 135 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 SLC25A18Q9H1K4 315 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 JKAMPQ9P055 326 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 MEGF11A6BM72 1044 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 TTRP02766 147 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 GAPDHP04406 335 aaKnown RBP7.44□□□□□ -1.22
VPS11-206ENST00000614944 CDK2P24941 298 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 F2RP25116 425 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 MFGE8Q08431 387 aaPredicted RBP7.44□□□□□ -1.22
VPS11-206ENST00000614944 KIAA1644Q3SXP7 199 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 DOK3Q7L591 496 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 RNF183Q96D59 192 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 OR51I2Q9H344 312 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 FBXL17Q9UF56 701 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 POLR1DQ9Y2S0 133 aa7.44□□□□□ -1.22
VPS11-206ENST00000614944 PHF3Q92576 2039 aaKnown RBP7.44□□□□□ -1.22
VPS11-206ENST00000614944 H0YIZ8 118 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 TNFRSF13BO14836 293 aaPredicted RBP7.43□□□□□ -1.22
VPS11-206ENST00000614944 OPRM1P35372 400 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 CX3CR1P49238 355 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 ACTL10Q5JWF8 245 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 TMEM211Q6ICI0 200 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 RPTNQ6XPR3 784 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 TMEM256Q8N2U0 113 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 P2RX4Q99571 388 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 HSPB9Q9BQS6 159 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 PYGO2Q9BRQ0 406 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 CHRDL1Q9BU40 450 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 VPREB3Q9UKI3 123 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 MRPS28Q9Y2Q9 187 aaKnown RBP7.43□□□□□ -1.22
VPS11-206ENST00000614944 A0A1B0GV50 99 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 GNG3P63215 75 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 PSG4Q00888 419 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 C3AR1Q16581 482 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 LYPD6Q86Y78 171 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 LGI3Q8N145 548 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 MUC15Q8N387 334 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 ZNF433Q8N7K0 673 aaPredicted RBP7.43□□□□□ -1.22
VPS11-206ENST00000614944 ZNF837Q96EG3 531 aaPredicted RBP7.43□□□□□ -1.22
VPS11-206ENST00000614944 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.43□□□□□ -1.22
VPS11-206ENST00000614944 ERG28Q9UKR5 140 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 WIPF3A6NGB9 483 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 RER1O15258 196 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 PIN1P1O15428 100 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 RUNX1Q01196 453 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 DEFB125Q8N687 156 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 ZNF676Q8N7Q3 588 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 PARLQ9H300 379 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 NPVFQ9HCQ7 196 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 CACNA1GO43497 2377 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 CEP250Q9BV73 2442 aa7.43□□□□□ -1.22
VPS11-206ENST00000614944 PRRG2O14669 202 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms