RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SLC25A38Q96DW6 304 aa7.63□□□□□ -1.19
TTC28-208ENST00000612946 F11RQ9Y624 299 aaKnown RBP7.63□□□□□ -1.19
TTC28-208ENST00000612946 DNAJC25-GNG10A0A024R161 153 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 ACTL10Q5JWF8 245 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 ASCL4Q6XD76 172 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 A0A1B0GUT8 65 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 LAMTOR5O43504 91 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 LYZL6O75951 148 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 CD160O95971 181 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 AMBPP02760 352 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 SH2D7A6NKC9 451 aaPredicted RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 CD5LO43866 347 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 SRD5A2P31213 254 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 PAX2Q02962 417 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 LRRC75BQ2VPJ9 315 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 COL16A1Q07092 1604 aaPredicted RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 HOXC4P09017 264 aaPredicted RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 EML5Q05BV3 1969 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 UBR3Q6ZT12 1888 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 H3BRM9 83 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 TMEM101Q96IK0 257 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 KLF13Q9Y2Y9 288 aaPredicted RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 STPG3Q8N7X2 389 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 RAB1BQ9H0U4 201 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 GABRG2P18507 467 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 MRPL27Q9P0M9 148 aaKnown RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 ZSWIM8A7E2V4 1837 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 SERF1AO75920 110 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 ATG4DQ86TL0 474 aaPredicted RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 CIARTQ8N365 385 aaPredicted RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 RSPO3Q9BXY4 272 aaPredicted RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 GEMIN7Q9H840 131 aaKnown RBP7.62□□□□□ -1.19
TTC28-208ENST00000612946 LY96Q9Y6Y9 160 aa7.62□□□□□ -1.19
TTC28-208ENST00000612946 A0A1W2PP11 408 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 NDUFS6O75380 124 aaKnown RBP7.61□□□□□ -1.19
TTC28-208ENST00000612946 NGFRP08138 427 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ID1P41134 155 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ZP1P60852 638 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ORMDL3Q8N138 153 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 TMEM140Q9NV12 185 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 RLN3Q8WXF3 142 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 WBP1LQ9NX94 342 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 PRDX2P32119 198 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ATRAIDQ6UW56 229 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ZNF645Q8N7E2 425 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ZNF479Q96JC4 524 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 DIRC2Q96SL1 478 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ALPK3Q96L96 1907 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 TMEM202A6NGA9 273 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 ORM2P19652 201 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 Q5BKY6 102 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 REG4Q9BYZ8 158 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 THAP10Q9P2Z0 257 aaPredicted RBP7.61□□□□□ -1.19
TTC28-208ENST00000612946 FRMPD3Q5JV73 1810 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 F11P03951 625 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 C19orf54Q5BKX5 351 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 FLYWCH2Q96CP2 140 aaKnown RBP7.61□□□□□ -1.19
TTC28-208ENST00000612946 C1RLQ9NZP8 487 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 CCL27Q9Y4X3 112 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 EML6Q6ZMW3 1958 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 PAAF1Q9BRP4 392 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 SOCS1O15524 211 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 C8orf88P0DMB2 117 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 CFAP161Q6P656 301 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 MUC15Q8N387 334 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 GATAD1Q8WUU5 269 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 GDF9O60383 454 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 IL36RNQ9UBH0 155 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 F8W1H4 67 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 C1QL1O75973 258 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 TSPOP30536 169 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 RHBDD2Q6NTF9 364 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 SPRED2Q7Z698 418 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 WNT10AQ9GZT5 417 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 IL23AQ9NPF7 189 aa7.61□□□□□ -1.19
TTC28-208ENST00000612946 NXT2Q9NPJ8 142 aaKnown RBP7.61□□□□□ -1.19
TTC28-208ENST00000612946 ZNF750Q32MQ0 723 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 ARPC1AQ92747 370 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 FOXB1Q99853 325 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 CXXC4Q9H2H0 198 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.6□□□□□ -1.19
TTC28-208ENST00000612946 OR2Z1Q8NG97 314 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 SPINK8P0C7L1 97 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 P2RY6Q15077 328 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 ZNF658BQ4V348 819 aaPredicted RBP7.6□□□□□ -1.19
TTC28-208ENST00000612946 OSTCQ9NRP0 149 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 ADAMTS7Q9UKP4 1686 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 FAM181BA6NEQ2 426 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 H7C1H1 209 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 ICAM4Q14773 271 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 BIVMQ86UB2 503 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 SOSTQ9BQB4 213 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 TRBV6-7A0A0A0MS04 114 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 PPIAL4DF5H284 164 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 J3QT63 122 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 PPP1CCP36873 323 aaKnown RBP7.6□□□□□ -1.19
TTC28-208ENST00000612946 TBR1Q16650 682 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 RPP21Q9H633 154 aaKnown RBP7.6□□□□□ -1.19
TTC28-208ENST00000612946 FGF21Q9NSA1 209 aa7.6□□□□□ -1.19
TTC28-208ENST00000612946 SLC23A3Q6PIS1 610 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms