RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 PSG5Q15238 335 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 FAM209AQ5JX71 171 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 WDR82Q6UXN9 313 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 SMIM15Q7Z3B0 74 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 FAM89BQ8N5H3 189 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 BTF3L4Q96K17 158 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 RBKSQ9H477 322 aa6.15□□□□□ -1.43
CSDE1-218ENST00000610726 PLXNB3Q9ULL4 1909 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF729A6NN14 1252 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-218ENST00000610726 HKR1P10072 659 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 TIMP3P35625 211 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 RPL8P62917 257 aaKnown RBP6.14□□□□□ -1.43
CSDE1-218ENST00000610726 CCDC144NLQ6NUI1 221 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 TEPPQ6URK8 271 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 RTN4RL2Q86UN3 420 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 DTX1Q86Y01 620 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 FAM24BQ8N5W8 94 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 MRPL30Q8TCC3 161 aaKnown RBP6.14□□□□□ -1.43
CSDE1-218ENST00000610726 POM121Q96HA1 1249 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 IGKV3-7A0A075B6H7 116 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 TRAV24A0A0B4J272 114 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 IGKV1D-13A0A0B4J2D9 117 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 MSGN1A6NI15 193 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 E9PLN8 166 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 SIGLEC5O15389 551 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 IGHV3-48P01763 117 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 IGKV1-13P0DP09 117 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 HTR1DP28221 377 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 CDKN1AP38936 164 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 SPCS3P61009 180 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 ARL16Q0P5N6 197 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 TMEM241Q24JQ0 296 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 PNKDQ8N490 385 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 OR4F17Q8NGA8 305 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 OR4X1Q8NH49 305 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 OR9G1Q8NH87 305 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 VKORC1Q9BQB6 163 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 COL25A1Q9BXS0 654 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-218ENST00000610726 CTDSP1Q9GZU7 261 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 TLNRD1Q9H1K6 362 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 CHODLQ9H9P2 273 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 IGHV3OR16-10A0A075B7F0 116 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 PAGE4O60829 102 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 CCL3L1P16619 93 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 MC5RP33032 325 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 TNFRSF9Q07011 255 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 FABP9Q0Z7S8 132 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 GLRX5Q86SX6 157 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 RPRMLQ8N4K4 120 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 PRSS33Q8NF86 280 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 RNASE6Q93091 150 aaKnown RBP6.14□□□□□ -1.43
CSDE1-218ENST00000610726 OR4C12Q96R67 309 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 AAMDCQ9H7C9 122 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 CLCF1Q9UBD9 225 aa6.14□□□□□ -1.43
CSDE1-218ENST00000610726 ETV2O00321 342 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 F12P00748 615 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 SELLP14151 372 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 RAB4AP20338 218 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 LURAP1Q96LR2 239 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 NDFIP1Q9BT67 221 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 PRO3102Q9H379 93 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 AURKAIP1Q9NWT8 199 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 METTL1Q9UBP6 276 aaKnown RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 WASHC3Q9Y3C0 194 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 LOC105371242A0A075B767 164 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 C11orf94C9JXX5 98 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 CLN5O75503 358 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 IGHG3P01860 377 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 PRR30Q53SZ7 412 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 C5orf24Q7Z6I8 188 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 TCTEX1D1Q8N7M0 179 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 NRIP2Q9BQI9 281 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 TMEM204Q9BSN7 226 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 NPVFQ9HCQ7 196 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 MIOXQ9UGB7 285 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 C17orf98A8MV24 154 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 PITX3O75364 302 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 SCGB1D1O95968 90 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 CRYBA1P05813 215 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 LIPFP07098 398 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 SPP1P10451 314 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 OR10J1P30954 320 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 OTX1P32242 354 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 HSPE1P61604 102 aaKnown RBP6.13□□□□□ -1.43
CSDE1-218ENST00000610726 OR5I1Q13606 314 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 SLC35E3Q7Z769 313 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 OR1L4Q8NGR5 311 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 AQP10Q96PS8 301 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 ZNF581Q9P0T4 197 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 TCF19Q9Y242 345 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 CCDC168Q8NDH2 2452 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 LINC00862A6NCI5 91 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 H0Y8G0 127 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 M0QZ24 198 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 REG1AP05451 166 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 NTF4P34130 210 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 FHITP49789 147 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 TUSC1Q2TAM9 212 aa6.13□□□□□ -1.43
CSDE1-218ENST00000610726 DHRS11Q6UWP2 260 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms