RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ZNF253O75346 499 aa10.46□□□□□ -0.74
CDCA3-212ENST00000604599 ARL14EPLP0DKL9 152 aa10.46□□□□□ -0.74
CDCA3-212ENST00000604599 CCL3P10147 92 aa10.46□□□□□ -0.74
CDCA3-212ENST00000604599 Q0VG73 95 aa10.46□□□□□ -0.74
CDCA3-212ENST00000604599 WDR74Q6RFH5 385 aaPredicted RBP10.46□□□□□ -0.74
CDCA3-212ENST00000604599 AAED1Q7RTV5 226 aa10.46□□□□□ -0.74
CDCA3-212ENST00000604599 ZNF738Q8NE65 137 aa10.46□□□□□ -0.74
CDCA3-212ENST00000604599 COX11Q9Y6N1 276 aa10.46□□□□□ -0.74
CDCA3-212ENST00000604599 LRP5LA4QPB2 252 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 C17orf112F2Z3M2 114 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 M0QZ24 198 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 DEGS1O15121 323 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 GDF9O60383 454 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 SLC35B1P78383 322 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 IGFBP7Q16270 282 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 OR8I2Q8N0Y5 310 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 FAM19A2Q8N3H0 131 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 ST6GALNAC3Q8NDV1 305 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 DLL3Q9NYJ7 618 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 RNF24Q9Y225 148 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 FREM2Q5SZK8 3169 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 MED12LQ86YW9 2145 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 IGLV3-12A0A075B6K2 115 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 ZIC3O60481 467 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 COL8A2P25067 703 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 C9orf135Q5VTT2 229 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 OR4C5Q8NGB2 326 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 CPT1CQ8TCG5 803 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 SPSB4Q96A44 273 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 CELSR3Q9NYQ7 3312 aa10.45□□□□□ -0.74
CDCA3-212ENST00000604599 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.44□□□□□ -0.74
CDCA3-212ENST00000604599 K7EP13 123 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 DKK1O94907 266 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 C3orf79P0CE67 100 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 LGALS4P56470 323 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 CEACAM21Q3KPI0 293 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 AARDQ4LEZ3 155 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 RABEPKQ7Z6M1 372 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 CBY3A6NI87 242 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 LRRC30A6NM36 301 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 TOMM40O96008 361 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 NTF3P20783 257 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 TSPOP30536 169 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 ZNF83P51522 516 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 MRPL21Q7Z2W9 205 aaKnown RBP10.44□□□□□ -0.74
CDCA3-212ENST00000604599 MMD2Q8IY49 270 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 ZNF808Q8N4W9 903 aaPredicted RBP10.44□□□□□ -0.74
CDCA3-212ENST00000604599 Q8N7P7 452 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 UHRF2Q96PU4 802 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 C1QTNF5Q9BXJ0 243 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 A0A1W2PS18 150 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 DPRXA6NFQ7 191 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 HTD2P86397 168 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 FBLN7Q53RD9 439 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 OR2M7Q8NG81 312 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 KCNS1Q96KK3 526 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 DEPPQ9NTK1 212 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 TRAPPC2LQ9UL33 140 aa10.44□□□□□ -0.74
CDCA3-212ENST00000604599 FAM186AA6NE01 2351 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 RRHO14718 337 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 S1PR2O95136 353 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 NXPH2O95156 264 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 LIFP15018 202 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 GFRA1P56159 465 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 PCBD1P61457 104 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 RPL31P62899 125 aaKnown RBP10.43□□□□□ -0.74
CDCA3-212ENST00000604599 RPEL1Q2QD12 228 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 FAM53AQ6NSI3 398 aaPredicted RBP10.43□□□□□ -0.74
CDCA3-212ENST00000604599 IGHV2OR16-5A0A0B4J2B6 119 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 TRIP6Q15654 476 aaKnown RBP10.43□□□□□ -0.74
CDCA3-212ENST00000604599 AKIRIN1Q9H9L7 192 aaPredicted RBP10.43□□□□□ -0.74
CDCA3-212ENST00000604599 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.43□□□□□ -0.74
CDCA3-212ENST00000604599 BET1LQ9NYM9 111 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 YTHDF2Q9Y5A9 579 aaKnown RBP10.43□□□□□ -0.74
CDCA3-212ENST00000604599 COL6A3P12111 3177 aa10.43□□□□□ -0.74
CDCA3-212ENST00000604599 ADAMTS20P59510 1910 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 A0A096LPE4 126 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 TRBV6-6A0A0A6YYG2 114 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 A0A1W2PPZ6 126 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 C5orf49A4QMS7 147 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 SCRG1O75711 98 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 RHBDL1O75783 438 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 TCL1AP56279 114 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 DSCR4P56555 118 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-212ENST00000604599 RPL30P62888 115 aaKnown RBP10.42□□□□□ -0.74
CDCA3-212ENST00000604599 YRDCQ86U90 279 aaKnown RBP10.42□□□□□ -0.74
CDCA3-212ENST00000604599 FAM58AQ8N1B3 248 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 TCTEX1D1Q8N7M0 179 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 PRDM14Q9GZV8 571 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 SLC35D1Q9NTN3 355 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 R4GN57 208 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 KMT2EQ8IZD2 1858 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 A0A1W2PR77 199 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 CXCL13O43927 109 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 ZNF324O75467 553 aaPredicted RBP10.42□□□□□ -0.74
CDCA3-212ENST00000604599 SRIP30626 198 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 S100A7P31151 101 aa10.42□□□□□ -0.74
CDCA3-212ENST00000604599 KLHDC1Q8N7A1 406 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms