RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SPEM2Q0P670 501 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 IBA57Q5T440 356 aaKnown RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 MRGPRX3Q96LB0 322 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 VSTM2LQ96N03 204 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 FLRT3Q9NZU0 649 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 SLC17A3O00476 420 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 ZFAND6Q6FIF0 208 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 CT55Q8WUE5 264 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 QTRT1Q9BXR0 403 aaKnown RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 FREM1Q5H8C1 2179 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 OR2A4O95047 310 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 ERGP11308 486 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 OR2A7Q96R45 310 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 SSBP4Q9BWG4 385 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 OR2H1Q9GZK4 316 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 MRPS18BQ9Y676 258 aaKnown RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BKO60814 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BJP06899 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BOP23527 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BBP33778 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BDP58876 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BCP62807 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST2H2BEQ16778 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 BEND2Q8NDZ0 799 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BHQ93079 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BNQ99877 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HIST1H2BMQ99879 126 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 COL11A2P13942 1736 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-216ENST00000602557 TANC2Q9HCD6 1990 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 PPYP01298 95 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 HMGA2P52926 109 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 TUSC5Q8IXB3 177 aa7.55□□□□□ -1.2
CSMD1-216ENST00000602557 ISXQ2M1V0 245 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 RIPPLY2Q5TAB7 128 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 LPAR2Q9HBW0 351 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 A0A1B0GU03 582 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 ROM1Q03395 351 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 HYAL1Q12794 435 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 OR1L1Q8NH94 360 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 CDIPTO14735 213 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 PLAUP00749 431 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 PRSS2P07478 247 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 SLC25A38Q96DW6 304 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 SHANK3Q9BYB0 1731 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 CISD3P0C7P0 127 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 GPR183P32249 361 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 KIR2DL1P43626 348 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-216ENST00000602557 KIR2DL2P43627 348 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-216ENST00000602557 TMEM45BQ96B21 275 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 SSBP3Q9BWW4 388 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-216ENST00000602557 NRN1Q9NPD7 142 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 TMEM160Q9NX00 188 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 CTGFP29279 349 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 OR52M1Q8NGK5 317 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 PAXXQ9BUH6 204 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 WNT5BQ9H1J7 359 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 KLHDC2Q9Y2U9 406 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 LGALS3P17931 250 aaKnown RBP7.54□□□□□ -1.2
CSMD1-216ENST00000602557 SRD5A2P31213 254 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 JOSD1Q15040 202 aaPredicted RBP7.54□□□□□ -1.2
CSMD1-216ENST00000602557 DEFB124Q8NES8 71 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 GLI3P10071 1580 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 EREGO14944 169 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 SERF1AO75920 110 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 MIC13Q5XKP0 118 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 FAM60AQ9NP50 221 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 ST6GALNAC2Q9UJ37 374 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 AGFG2O95081 481 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 IGHV4-39P01824 125 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 PSG1P11464 419 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 EGR1P18146 543 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 TRA2AQ13595 282 aaKnown RBP eCLIP7.54□□□□□ -1.2
CSMD1-216ENST00000602557 TMEM92Q6UXU6 159 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 FAM222BQ8WU58 562 aa7.54□□□□□ -1.2
CSMD1-216ENST00000602557 CEACAM3P40198 252 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 MAGEA5P43359 124 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 MMD2Q8IY49 270 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 ZPLD1Q8TCW7 415 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 UCN2Q96RP3 112 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 SLC25A33Q9BSK2 321 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 RTN4RQ9BZR6 473 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 ITGBL1O95965 494 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-216ENST00000602557 VDAC1P21796 283 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 GPX4P36969 197 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-216ENST00000602557 C1orf122Q6ZSJ8 110 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 ATG4DQ86TL0 474 aaPredicted RBP7.53□□□□□ -1.2
CSMD1-216ENST00000602557 HOGA1Q86XE5 327 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 PNKDQ8N490 385 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 OR4D5Q8NGN0 318 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 VSTM2AQ8TAG5 236 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 GPHA2Q96T91 129 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 CD3EP07766 207 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 CKS2P33552 79 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 SGK494Q96LW2 274 aa7.53□□□□□ -1.2
CSMD1-216ENST00000602557 C18orf15Q96N68 181 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms