RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
SMG9-211ENST00000601170 IGHV2OR16-5A0A0B4J2B6 119 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 PHOX2AO14813 284 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 IGLV1-44P01699 117 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 ADH4P08319 380 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 OR9G9P0C7N8 305 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 MDKP21741 143 aaPredicted RBP12.04□□□□□ -0.48
SMG9-211ENST00000601170 TUBG1P23258 451 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 RPL23P62829 140 aaKnown RBP12.04□□□□□ -0.48
SMG9-211ENST00000601170 GNB2P62879 340 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 HTD2P86397 168 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 BSXQ3C1V8 233 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 MBNL2Q5VZF2 373 aaKnown RBP12.04□□□□□ -0.48
SMG9-211ENST00000601170 OR10D4PQ8NGN7 298 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 TUBG2Q9NRH3 451 aa12.04□□□□□ -0.48
SMG9-211ENST00000601170 CFAP47Q6ZTR5 3102 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 PRR33A8MZF0 331 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 EGR1P18146 543 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 PRDX2P32119 198 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 GPR12P47775 334 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 SARAFQ96BY9 339 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 FCGR3BO75015 233 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 PROP1O75360 226 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 CD82P27701 267 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 DUTP33316 252 aaKnown RBP12.03□□□□□ -0.48
SMG9-211ENST00000601170 CDPF1Q6NVV7 123 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 TRAT1Q6PIZ9 186 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 OR2Z1Q8NG97 314 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 OPN3Q9H1Y3 402 aaPredicted RBP12.03□□□□□ -0.48
SMG9-211ENST00000601170 PLSCR4Q9NRQ2 329 aa12.03□□□□□ -0.48
SMG9-211ENST00000601170 TRBV23-1A0A0A0MS06 115 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 PAGE4O60829 102 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.49
SMG9-211ENST00000601170 RD3LP0DJH9 198 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 PAX5Q02548 391 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 OR10A7Q8NGE5 316 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 OR6C3Q9NZP0 311 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 GNG12Q9UBI6 72 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 DMRT1Q9Y5R6 373 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 CACNA1GO43497 2377 aa12.02□□□□□ -0.49
SMG9-211ENST00000601170 IGKV1D-17A0A075B6S4 117 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 TRAV17A0A0B4J275 112 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 WT1P19544 449 aaPredicted RBP12.01□□□□□ -0.49
SMG9-211ENST00000601170 CDC34P49427 236 aaPredicted RBP12.01□□□□□ -0.49
SMG9-211ENST00000601170 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 IGFL2Q6UWQ7 119 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 SSX9Q7RTT3 188 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 Q8N7P7 452 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 SNX22Q96L94 193 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 HEATR1Q9H583 2144 aaKnown RBP12.01□□□□□ -0.49
SMG9-211ENST00000601170 HCFC1P51610 2035 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 TNFSF13O75888 250 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 RTP5Q14D33 572 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 FAM234AQ9H0X4 552 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 ZNF71Q9NQZ8 489 aaPredicted RBP12.01□□□□□ -0.49
SMG9-211ENST00000601170 DUSP13Q9UII6 198 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 JPT1Q9UK76 154 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 INTS1Q8N201 2190 aaKnown RBP12.01□□□□□ -0.49
SMG9-211ENST00000601170 BDP1A6H8Y1 2624 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 NBEAQ8NFP9 2946 aa12.01□□□□□ -0.49
SMG9-211ENST00000601170 A0A1B0GWJ7 208 aa12□□□□□ -0.49
SMG9-211ENST00000601170 SRRM5B3KS81 715 aa12□□□□□ -0.49
SMG9-211ENST00000601170 H7BYZ3 331 aa12□□□□□ -0.49
SMG9-211ENST00000601170 HPRT1P00492 218 aa12□□□□□ -0.49
SMG9-211ENST00000601170 FABP4P15090 132 aa12□□□□□ -0.49
SMG9-211ENST00000601170 CD1BP29016 333 aa12□□□□□ -0.49
SMG9-211ENST00000601170 GALR1P47211 349 aa12□□□□□ -0.49
SMG9-211ENST00000601170 MZT1Q08AG7 82 aa12□□□□□ -0.49
SMG9-211ENST00000601170 ACOT6Q3I5F7 207 aaPredicted RBP12□□□□□ -0.49
SMG9-211ENST00000601170 MORN2Q502X0 79 aa12□□□□□ -0.49
SMG9-211ENST00000601170 PRAMEF5Q5TYX0 476 aa12□□□□□ -0.49
SMG9-211ENST00000601170 SRD5A3Q9H8P0 318 aa12□□□□□ -0.49
SMG9-211ENST00000601170 PROCRQ9UNN8 238 aa12□□□□□ -0.49
SMG9-211ENST00000601170 GAB2Q9UQC2 676 aa12□□□□□ -0.49
SMG9-211ENST00000601170 WDR83OSQ9Y284 106 aa12□□□□□ -0.49
SMG9-211ENST00000601170 GZMHP20718 246 aa12□□□□□ -0.49
SMG9-211ENST00000601170 MSMPQ1L6U9 139 aa12□□□□□ -0.49
SMG9-211ENST00000601170 BHLHA15Q7RTS1 189 aaPredicted RBP12□□□□□ -0.49
SMG9-211ENST00000601170 LRP11Q86VZ4 500 aa12□□□□□ -0.49
SMG9-211ENST00000601170 ZNF383Q8NA42 475 aa12□□□□□ -0.49
SMG9-211ENST00000601170 OR51G1Q8NGK1 321 aa12□□□□□ -0.49
SMG9-211ENST00000601170 OR4X1Q8NH49 305 aa12□□□□□ -0.49
SMG9-211ENST00000601170 Q8TCH9 128 aa12□□□□□ -0.49
SMG9-211ENST00000601170 STARD4Q96DR4 205 aa12□□□□□ -0.49
SMG9-211ENST00000601170 NEIL1Q96FI4 390 aaPredicted RBP12□□□□□ -0.49
SMG9-211ENST00000601170 DIRC2Q96SL1 478 aa12□□□□□ -0.49
SMG9-211ENST00000601170 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
SMG9-211ENST00000601170 DKK4Q9UBT3 224 aa12□□□□□ -0.49
SMG9-211ENST00000601170 IGHV3OR15-7A0A075B7D8 119 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 M0R1X1 148 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 IGHV3-13P01766 116 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 IGHV3-7P01780 117 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 RPL39P5Q59GN2 51 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 GCSAMLQ5JQS6 135 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 ALKBH2Q6NS38 261 aa11.99□□□□□ -0.49
SMG9-211ENST00000601170 FAM90A1Q86YD7 464 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms