RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ADAM30Q9UKF2 790 aa10.86□□□□□ -0.67
UPF1-205ENST00000598209 PRELID3BQ9Y3B1 194 aa10.86□□□□□ -0.67
UPF1-205ENST00000598209 FBXO7Q9Y3I1 522 aa10.86□□□□□ -0.67
UPF1-205ENST00000598209 TRAV41A0A0B4J266 112 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 SRRM4A7MD48 611 aaKnown RBP10.85□□□□□ -0.67
UPF1-205ENST00000598209 NUDT19A8MXV4 375 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 H3BMQ9 156 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 SULT1C2O00338 296 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 RGS5O15539 181 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 FCGR3BO75015 233 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 PF4P02776 101 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 RPLP1P05386 114 aaKnown RBP10.85□□□□□ -0.67
UPF1-205ENST00000598209 ELANEP08246 267 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
UPF1-205ENST00000598209 RFX2P48378 723 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 HERV-K104P61576 105 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 EIF4EBP1Q13541 118 aaPredicted RBP10.85□□□□□ -0.67
UPF1-205ENST00000598209 DYRK1AQ13627 763 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 ECSCRQ19T08 205 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 OR2B11Q5JQS5 317 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 C18orf65Q6ZTR6 163 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 OVCH2Q7RTZ1 564 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 LYSMD2Q8IV50 215 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 RNF152Q8N8N0 203 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 DYNC2LI1Q8TCX1 351 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 TCTEX1D2Q8WW35 142 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 ISOC1Q96CN7 298 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 MIXL1Q9H2W2 232 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 TAS2R8Q9NYW2 309 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 CCDC59Q9P031 241 aaKnown RBP10.85□□□□□ -0.67
UPF1-205ENST00000598209 TNCP24821 2201 aa10.85□□□□□ -0.67
UPF1-205ENST00000598209 CTDSP2O14595 271 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 CRYGBP07316 175 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 EGR2P11161 476 aaPredicted RBP10.84□□□□□ -0.67
UPF1-205ENST00000598209 PSMB8P28062 276 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 HLA-DMAP28067 261 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 RCVRNP35243 200 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 HRH1P35367 487 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 CRIP2P52943 208 aaPredicted RBP10.84□□□□□ -0.67
UPF1-205ENST00000598209 MSMO1Q15800 293 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 C19orf54Q5BKX5 351 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 RNASE12Q5GAN4 147 aaKnown RBP10.84□□□□□ -0.67
UPF1-205ENST00000598209 DHRS11Q6UWP2 260 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 ZNF562Q6V9R5 426 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 ZNF66Q6ZN08 573 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 PPP1R27Q86WC6 154 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 TMEM17Q86X19 198 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 LAX1Q8IWV1 398 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 MFSD4AQ8N468 514 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 ZBTB34Q8NCN2 500 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 KLHL30-AS1Q8NEE0 82 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 OSR1Q8TAX0 266 aaPredicted RBP10.84□□□□□ -0.67
UPF1-205ENST00000598209 GPHA2Q96T91 129 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 DCUN1D5Q9BTE7 237 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 NUBP2Q9Y5Y2 271 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 CEPT1Q9Y6K0 416 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 A3GALT2U3KPV4 340 aa10.84□□□□□ -0.67
UPF1-205ENST00000598209 ARPC1BO15143 372 aaKnown RBP10.83□□□□□ -0.68
UPF1-205ENST00000598209 TNFSF12O43508 249 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 TPPPO94811 219 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 UBE2KP61086 200 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 TMEM267Q0VDI3 215 aaPredicted RBP10.83□□□□□ -0.68
UPF1-205ENST00000598209 PJVKQ0ZLH3 352 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 FXYD3Q14802 87 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 VMA21Q3ZAQ7 101 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 C8orf86Q6ZUL3 223 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 ZNF695Q8IW36 515 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 TEX45Q8NA69 505 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 MINDY2Q8NBR6 621 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 ARPC1AQ92747 370 aa10.83□□□□□ -0.68
UPF1-205ENST00000598209 ZNF2Q9BSG1 426 aaPredicted RBP10.83□□□□□ -0.68
UPF1-205ENST00000598209 FAM103A1Q9BTL3 118 aaKnown RBP10.83□□□□□ -0.68
UPF1-205ENST00000598209 A0A1W2PN81 502 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 CNIH1O95406 144 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 IGLV1-40P01703 118 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 SLC6A1P30531 599 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 CHRNA7P36544 502 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 KIR2DS2P43631 304 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 GNB1P62873 340 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 SSBP2P81877 361 aaPredicted RBP10.82□□□□□ -0.68
UPF1-205ENST00000598209 TMEM65Q6PI78 240 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 UNQ5815/PRO19632Q6UWF5 114 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 ETV3LQ6ZN32 361 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 IDO2Q6ZQW0 420 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 ZNF818PQ6ZRF7 136 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 TCTEX1D1Q8N7M0 179 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 OR6F1Q8NGZ6 308 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 OR52I2Q8NH67 350 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 GRPEL2Q8TAA5 225 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 C15orf40Q8WUR7 153 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 MOB3AQ96BX8 217 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 ABHD1Q96SE0 405 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 KLK15Q9H2R5 256 aa10.82□□□□□ -0.68
UPF1-205ENST00000598209 FOXA2Q9Y261 457 aaPredicted RBP10.82□□□□□ -0.68
UPF1-205ENST00000598209 CCDC160A6NGH7 325 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 SOX15O60248 233 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 SAA1P0DJI8 122 aaPredicted RBP10.81□□□□□ -0.68
UPF1-205ENST00000598209 CD33P20138 364 aa10.81□□□□□ -0.68
UPF1-205ENST00000598209 CDX1P47902 265 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms