RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 GPR137BO60478 399 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 OR4E1P0C645 316 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 F2RP25116 425 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 PPP1R1AQ13522 171 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 KCTD9Q7L273 389 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 SGPP2Q8IWX5 399 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 OR51H1Q8NH63 302 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 NAA60Q9H7X0 242 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
TRIM28-207ENST00000597136 IGHV1-3A0A0C4DH29 117 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 OOSP1A8MZH6 123 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 DHFRP00374 187 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 IL5P05113 134 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 THBS3P49746 956 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 RELBQ01201 579 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 AANATQ16613 207 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 C4orf46Q504U0 113 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 TMEM219Q86XT9 240 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 ZNF383Q8NA42 475 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 TCTEX1D2Q8WW35 142 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 DDB2Q92466 427 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 ADTRPQ96IZ2 230 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 NABP2Q9BQ15 211 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 TNCP24821 2201 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 A0A0B4J293 547 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 C3orf85A0A1B0GTC6 90 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 A0A1W2PPI3 338 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 TXNL1O43396 289 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 CHST1O43916 411 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 PRAF2O60831 178 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 VAMP1P23763 118 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 BRWD1-AS2P59051 145 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 CATR1Q13166 79 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 DHRS2Q13268 280 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 TATDN3Q17R31 274 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 GLDNQ6ZMI3 551 aaPredicted RBP12.01□□□□□ -0.49
TRIM28-207ENST00000597136 OR5R1Q8NH85 324 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 GALNT14Q96FL9 552 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 TP53RKQ96S44 253 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 SEC22CQ9BRL7 303 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 LIN7CQ9NUP9 197 aaKnown RBP12.01□□□□□ -0.49
TRIM28-207ENST00000597136 KCNIP3Q9Y2W7 256 aa12.01□□□□□ -0.49
TRIM28-207ENST00000597136 C9orf170A2RU37 121 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 H0Y980 276 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 TIMM23O14925 209 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 SFT2D2O95562 160 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 HLA-AP01891 365 aaKnown RBP12□□□□□ -0.49
TRIM28-207ENST00000597136 OR5AC1P0C628 307 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 DYNLT3P51808 116 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 SP6Q3SY56 376 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 CCDC144NLQ6NUI1 221 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 C11orf88Q6PI97 169 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 Q6ZNX1 250 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 LYG2Q86SG7 212 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 OR8H3Q8N146 312 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 OR5AN1Q8NGI8 311 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 OR52B4Q8NGK2 314 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 CFHR4Q92496 578 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 PRELID3BQ9Y3B1 194 aa12□□□□□ -0.49
TRIM28-207ENST00000597136 IGHV3-72A0A0B4J1Y9 119 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 A6NDX4 124 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 BTBD17A6NE02 478 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 H0YJW9 148 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 B3GALNT1O75752 331 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 OR2B11Q5JQS5 317 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 MOB3BQ86TA1 216 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 SPAG16Q8N0X2 631 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 TCTEX1D1Q8N7M0 179 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 GLYATL2Q8WU03 294 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 TMEM222Q9H0R3 208 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 C1RLQ9NZP8 487 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 TCF19Q9Y242 345 aa11.99□□□□□ -0.49
TRIM28-207ENST00000597136 RAMP3O60896 148 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 FCGR3BO75015 233 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 DUS4LO95620 317 aaKnown RBP11.98□□□□□ -0.49
TRIM28-207ENST00000597136 HKR1P10072 659 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 KIR2DS2P43631 304 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 TAGLNQ01995 201 aaKnown RBP11.98□□□□□ -0.49
TRIM28-207ENST00000597136 HABP2Q14520 560 aaPredicted RBP11.98□□□□□ -0.49
TRIM28-207ENST00000597136 TMEM187Q14656 261 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 ZNF585BQ52M93 769 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 CD300LFQ8TDQ1 290 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 ZNF431Q8TF32 576 aaPredicted RBP11.98□□□□□ -0.49
TRIM28-207ENST00000597136 CASTOR1Q8WTX7 329 aa11.98□□□□□ -0.49
TRIM28-207ENST00000597136 GPN1Q9HCN4 374 aaPredicted RBP11.98□□□□□ -0.49
TRIM28-207ENST00000597136 FAM212BQ9NTI7 297 aaPredicted RBP11.98□□□□□ -0.49
TRIM28-207ENST00000597136 C7orf66A4D0T2 115 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 FAM90A9PA6NNJ1 464 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 SNRPGP15A8MWD9 76 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 RBFOX2O43251 390 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIM28-207ENST00000597136 APOA2P02652 100 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 SERPINE2P07093 398 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 ANXA3P12429 323 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 UCP1P25874 307 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 BRS3P32247 399 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 MC5RP33032 325 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 RTL8BQ17RB0 113 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 ANKRD55Q3KP44 614 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 SLC35D1Q9NTN3 355 aa11.97□□□□□ -0.49
TRIM28-207ENST00000597136 PRR13Q9NZ81 148 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms