RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CD177Q8N6Q3 437 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 OR10V1Q8NGI7 309 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 SCARB1Q8WTV0 552 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 SECTM1Q8WVN6 248 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 TAF9BQ9HBM6 251 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 CCL28Q9NRJ3 127 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 KIF25Q9UIL4 384 aa10.37□□□□□ -0.75
SCAF1-202ENST00000595242 IGKV1D-17A0A075B6S4 117 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 KANTRA0A1W2PQU2 76 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 FSTL3O95633 263 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 CDS2O95674 445 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 PSG2P11465 335 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 IGLL1P15814 213 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 S100GP29377 79 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 LUMP51884 338 aaPredicted RBP10.36□□□□□ -0.75
SCAF1-202ENST00000595242 SP6Q3SY56 376 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 FAM201AQ5SY85 155 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 CMTM1Q8IZ96 169 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 KLHDC1Q8N7A1 406 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 INO80EQ8NBZ0 244 aaPredicted RBP10.36□□□□□ -0.75
SCAF1-202ENST00000595242 OR5D13Q8NGL4 314 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 R3HDM4Q96D70 268 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 PHYHIPLQ96FC7 376 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 SNX22Q96L94 193 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 SIRPDQ9H106 197 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 ZFP57Q9NU63 452 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 KCNIP1Q9NZI2 227 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 OR1A1Q9P1Q5 309 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 ZNRD1Q9P1U0 126 aa10.36□□□□□ -0.75
SCAF1-202ENST00000595242 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 C12orf77C9JDV5 145 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 C3orf84H3BNL1 204 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 PGLYRP1O75594 196 aaPredicted RBP10.35□□□□□ -0.75
SCAF1-202ENST00000595242 FBP1P09467 338 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 F2RP25116 425 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 PRDX2P32119 198 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 AP2S1P53680 142 aaPredicted RBP10.35□□□□□ -0.75
SCAF1-202ENST00000595242 LYZL2Q7Z4W2 148 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 MOGAT3Q86VF5 341 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 SLC35G3Q8N808 338 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 ZBTB34Q8NCN2 500 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 OR4F17Q8NGA8 305 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 PPP1R35Q8TAP8 253 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 STOML3Q8TAV4 291 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 ST8SIA2Q92186 375 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 DCUN1D4Q92564 292 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 ABHD14BQ96IU4 210 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 OR4F4Q96R69 305 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 MED9Q9NWA0 146 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 OR5AC2Q9NZP5 309 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 RNF7Q9UBF6 113 aa10.35□□□□□ -0.75
SCAF1-202ENST00000595242 LYSTQ99698 3801 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 LRRC30A6NM36 301 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 MGST3O14880 152 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 DEDDO75618 318 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 IGLV2-14P01704 120 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 AESQ08117 197 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 SELENOHQ8IZQ5 122 aaKnown RBP10.34□□□□□ -0.75
SCAF1-202ENST00000595242 C1orf87Q8N0U7 546 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 OR8H3Q8N146 312 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 OR4D5Q8NGN0 318 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 OR1S1Q8NH92 325 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 ANGPTL6Q8NI99 470 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 GALMQ96C23 342 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 RRNAD1Q96FB5 475 aaKnown RBP10.34□□□□□ -0.75
SCAF1-202ENST00000595242 SDSLQ96GA7 329 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 SPIN2AQ99865 258 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 SPIN2BQ9BPZ2 258 aa10.34□□□□□ -0.75
SCAF1-202ENST00000595242 UBE2J1Q9Y385 318 aaPredicted RBP10.34□□□□□ -0.75
SCAF1-202ENST00000595242 DNAH7Q8WXX0 4024 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 C15orf65H3BRN8 121 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 HSD17B6O14756 317 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 HBZP02008 142 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 SLC25A6P12236 298 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 CD33P20138 364 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 NUP62P37198 522 aaPredicted RBP10.33□□□□□ -0.76
SCAF1-202ENST00000595242 RAB14P61106 215 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 ARF6P62330 175 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 HTD2P86397 168 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 HOXA4Q00056 320 aaPredicted RBP10.33□□□□□ -0.76
SCAF1-202ENST00000595242 SMCO1Q147U7 214 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 NMSQ5H8A3 153 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 KRBOX4Q5JUW0 171 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 TMEM268Q5VZI3 342 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 TEX36Q5VZQ5 186 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 STUMQ69YW2 141 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 OR5R1Q8NH85 324 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 OR2T6Q8NHC8 308 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 IL1F10Q8WWZ1 152 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 RBPMSQ93062 196 aaKnown RBP10.33□□□□□ -0.76
SCAF1-202ENST00000595242 DNTTIP1Q9H147 329 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 C11orf1Q9H5F2 150 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 DSCAML1Q8TD84 2053 aa10.33□□□□□ -0.76
SCAF1-202ENST00000595242 MSGN1A6NI15 193 aa10.32□□□□□ -0.76
SCAF1-202ENST00000595242 K7EPK0 472 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms