RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CNBD2Q96M20 576 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 SERPINI1Q99574 410 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 TBX5Q99593 518 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 CCDC32Q9BV29 185 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 MND1Q9BWT6 205 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 MAP1LC3BQ9GZQ8 125 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 ISG20L2Q9H9L3 353 aaKnown RBP3.52□□□□□ -1.85
SMAD4-216ENST00000593223 CISHQ9NSE2 258 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 MED29Q9NX70 200 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 COA4Q9NYJ1 87 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 COPZ2Q9P299 210 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF257Q9Y2Q1 563 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 LCTP09848 1927 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 LOXHD1Q8IVV2 1947 aa3.52□□□□□ -1.85
SMAD4-216ENST00000593223 JMJD1CQ15652 2540 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 RTTNQ86VV8 2226 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 IGHV3-35A0A0C4DH35 117 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 A0A0G2JLM5 398 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF705EA8MWA4 302 aaPredicted RBP3.51□□□□□ -1.85
SMAD4-216ENST00000593223 E9PLD3 99 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 LINC01619G3V211 115 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 M0QYV0 167 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 CA11O75493 328 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 GCM2O75603 506 aaPredicted RBP3.51□□□□□ -1.85
SMAD4-216ENST00000593223 REM1O75628 298 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 SERPINB7O75635 380 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 TTRP02766 147 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 IFNA4P05014 189 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 MMP7P09237 267 aaPredicted RBP3.51□□□□□ -1.85
SMAD4-216ENST00000593223 OR56A5P0C7T3 313 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 SMIM10L2AP0DMW4 78 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 SMIM10L2BP0DMW5 78 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 CD1EP15812 388 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 GGT1P19440 569 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 APOC4P55056 127 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 BIDP55957 195 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 MTPNP58546 118 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 CKS1BP61024 79 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 MXD1Q05195 221 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 PRDX1Q06830 199 aaKnown RBP3.51□□□□□ -1.85
SMAD4-216ENST00000593223 BAMBIQ13145 260 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 KLF17Q5JT82 389 aaPredicted RBP3.51□□□□□ -1.85
SMAD4-216ENST00000593223 AKR1C8PQ5T2L2 129 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 C11orf71Q6IPW1 123 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 Q6ZVH6 145 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 CALHM3Q86XJ0 350 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 DOLPP1Q86YN1 238 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 SLC35G3Q8N808 338 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 OR5J2Q8NH18 312 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 ZFP90Q8TF47 636 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 SDR42E1Q8WUS8 393 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 GHSRQ92847 366 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 FGF13Q92913 245 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 ACY3Q96HD9 319 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 RDH12Q96NR8 316 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 OR2M4Q96R27 311 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 EBPLQ9BY08 206 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 MROQ9BYG7 248 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 SELENOIQ9C0D9 397 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 OR51I2Q9H344 312 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 RNF167Q9H6Y7 350 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 DPM3Q9P2X0 92 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF223Q9UK11 482 aaPredicted RBP3.51□□□□□ -1.85
SMAD4-216ENST00000593223 NAV1Q8NEY1 1877 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 CCDC168Q8NDH2 2452 aa3.51□□□□□ -1.85
SMAD4-216ENST00000593223 UQCRHLA0A096LP55 91 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 BORCS7-ASMTA0A0B4J1R7 106 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 C9orf170A2RU37 121 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF726A6NNF4 738 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 D6RAR5 112 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 I3L4J1 428 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 FAAHO00519 579 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 COPEO14579 308 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 CYB5BO43169 146 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 SCRG1O75711 98 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 AIFM1O95831 613 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 C1QCP02747 245 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 UQCRHP07919 91 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 HTR1AP08908 422 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 TSPAN19P0C672 248 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 RBMY1CP0DJD4 496 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 CT45A10P0DMU9 189 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 ESDP10768 282 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 DDTP30046 118 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 MIPP30301 263 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 AGTR1P30556 359 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 CDKN2BP42772 138 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 SERPINB10P48595 397 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 PIGPP57054 158 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 TPI1P60174 286 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 HBG1P69891 147 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 HBG2P69892 147 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 EMX2Q04743 252 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 KIAA0040Q15053 153 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 ZNF79Q15937 498 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 IAH1Q2TAA2 248 aaPredicted RBP3.5□□□□□ -1.85
SMAD4-216ENST00000593223 RNASE10Q5GAN6 216 aaKnown RBP3.5□□□□□ -1.85
SMAD4-216ENST00000593223 TNFAIP8L3Q5GJ75 292 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 NEGR1Q7Z3B1 354 aa3.5□□□□□ -1.85
SMAD4-216ENST00000593223 PPP1R27Q86WC6 154 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms