RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 TAGLNQ01995 201 aaKnown RBP10.94□□□□□ -0.66
VMP1-217ENST00000593168 IL15RAQ13261 267 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 HLA-DRB5Q30154 266 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 NOXA1Q86UR1 476 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 LSM10Q969L4 123 aaKnown RBP10.94□□□□□ -0.66
VMP1-217ENST00000593168 WDR89Q96FK6 387 aaPredicted RBP10.94□□□□□ -0.66
VMP1-217ENST00000593168 C1orf159Q96HA4 380 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 OR10C1Q96KK4 312 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 HYLS1Q96M11 299 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 SPIN2AQ99865 258 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 SPIN2BQ9BPZ2 258 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 SIRPDQ9H106 197 aa10.94□□□□□ -0.66
VMP1-217ENST00000593168 SVEP1Q4LDE5 3571 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 MPTX1A8MV57 137 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 G3V3Q6 166 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 SMLR1H3BR10 107 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 ATG12O94817 140 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 IGKV1-39P01597 117 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 IGKV1D-39P04432 117 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 CT45A6P0DMU7 189 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 CT45A5P0DMU8 189 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 CT45A7P0DMV0 189 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 EIF2B2P49770 351 aaKnown RBP10.93□□□□□ -0.66
VMP1-217ENST00000593168 LINC00205P59089 165 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 FGL1Q08830 312 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 IAH1Q2TAA2 248 aaPredicted RBP10.93□□□□□ -0.66
VMP1-217ENST00000593168 KRTAP24-1Q3LI83 254 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 NMSQ5H8A3 153 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 PNKDQ8N490 385 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 ZNF383Q8NA42 475 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 DRAXINQ8NBI3 349 aaPredicted RBP10.93□□□□□ -0.66
VMP1-217ENST00000593168 PLEKHA2Q9HB19 425 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 COMMD9Q9P000 198 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 ZNRD1Q9P1U0 126 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 AMMECR1Q9Y4X0 333 aaPredicted RBP10.93□□□□□ -0.66
VMP1-217ENST00000593168 INSIG2Q9Y5U4 225 aa10.93□□□□□ -0.66
VMP1-217ENST00000593168 A0A096LNT2 108 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 BUB1B-PAK6H3BSN5 160 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 RAMP3O60896 148 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 FCGR3BO75015 233 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 HPRT1P00492 218 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 SLC25A6P12236 298 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 MMP9P14780 707 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 COX7A1P24310 79 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 PAX8Q06710 450 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 LOXL1Q08397 574 aaPredicted RBP10.92□□□□□ -0.66
VMP1-217ENST00000593168 Q5BKY6 102 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 VMO1Q7Z5L0 202 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 ZBTB8BQ8NAP8 495 aaPredicted RBP10.92□□□□□ -0.66
VMP1-217ENST00000593168 OR4P4Q8NGL7 312 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 PPP1R1CQ8WVI7 109 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 PCGF1Q9BSM1 259 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 SIRT7Q9NRC8 400 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 ZFP57Q9NU63 452 aa10.92□□□□□ -0.66
VMP1-217ENST00000593168 A0A1B0GU03 582 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 B4DSR2 109 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 LY6LH3BQJ8 138 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 SNAPC5O75971 98 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 TOX4O94842 621 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 MSMBP08118 114 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 FAM157CP0CG43 387 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 RRASP10301 218 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 PSMB6P28072 239 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 DLX1P56177 255 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 ZNF816Q0VGE8 651 aaPredicted RBP10.91□□□□□ -0.66
VMP1-217ENST00000593168 OR2B11Q5JQS5 317 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 DHRS7BQ6IAN0 325 aaPredicted RBP10.91□□□□□ -0.66
VMP1-217ENST00000593168 TGIF2LXQ8IUE1 241 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 FAM219AQ8IW50 185 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 OR5AN1Q8NGI8 311 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 OR4S2Q8NH73 311 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 GPR146Q96CH1 333 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 RRNAD1Q96FB5 475 aaKnown RBP10.91□□□□□ -0.66
VMP1-217ENST00000593168 NABP2Q9BQ15 211 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 MMP24Q9Y5R2 645 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 WNK2Q9Y3S1 2297 aa10.91□□□□□ -0.66
VMP1-217ENST00000593168 TRAV14DV4A0A0A6YYC5 116 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 ODF3BA8MYP8 253 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 LEUTXA8MZ59 168 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 TXNL1O43396 289 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 S1PR2O95136 353 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 MPC2O95563 127 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 GAPDHP04406 335 aaKnown RBP10.9□□□□□ -0.66
VMP1-217ENST00000593168 ARG1P05089 322 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 SLC25A4P12235 298 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 HTR1DP28221 377 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 ARHGDIBP52566 201 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 AKR1C2P52895 323 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 THOC7Q6I9Y2 204 aaKnown RBP10.9□□□□□ -0.66
VMP1-217ENST00000593168 OR11H4Q8NGC9 324 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 RNASE11Q8TAA1 199 aaKnown RBP10.9□□□□□ -0.66
VMP1-217ENST00000593168 TBX15Q96SF7 602 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 MRPL20Q9BYC9 149 aaKnown RBP10.9□□□□□ -0.66
VMP1-217ENST00000593168 SLC35D1Q9NTN3 355 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 GSKIPQ9P0R6 139 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 DPM3Q9P2X0 92 aa10.9□□□□□ -0.66
VMP1-217ENST00000593168 A0A0G2JRQ6 117 aa10.89□□□□□ -0.67
VMP1-217ENST00000593168 HMSDA8MTL9 139 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms