RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 FAM103A1Q9BTL3 118 aaKnown RBP10.91□□□□□ -0.66
CLIP3-205ENST00000592017 EHFQ9NZC4 300 aa10.91□□□□□ -0.66
CLIP3-205ENST00000592017 FBXO7Q9Y3I1 522 aa10.91□□□□□ -0.66
CLIP3-205ENST00000592017 TNFSF12O43508 249 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 FCGR3BO75015 233 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 SLC22A5O76082 557 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 PMP2P02689 132 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 CD33P20138 364 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 RPL5P46777 297 aaKnown RBP10.9□□□□□ -0.66
CLIP3-205ENST00000592017 HERV-K104P61576 105 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 TAGLNQ01995 201 aaKnown RBP10.9□□□□□ -0.66
CLIP3-205ENST00000592017 FOXE3Q13461 319 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 ZNF660Q6AZW8 331 aaPredicted RBP10.9□□□□□ -0.66
CLIP3-205ENST00000592017 TMEM17Q86X19 198 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 OR5H2Q8NGV7 314 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 GRPEL2Q8TAA5 225 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 TCTEX1D2Q8WW35 142 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 DDB2Q92466 427 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 DCUN1D5Q9BTE7 237 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 ZFP57Q9NU63 452 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 TAS2R8Q9NYW2 309 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 EXTL2Q9UBQ6 330 aa10.9□□□□□ -0.66
CLIP3-205ENST00000592017 A0A1W2PN81 502 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 RGS5O15539 181 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 IGLV2-14P01704 120 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 IGLV2-23P01705 113 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 IGHG4P01861 327 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 ELANEP08246 267 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 CHRNA7P36544 502 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 LGALS7P47929 136 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 TAS2R46P59540 309 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 RPL30P62888 115 aaKnown RBP10.89□□□□□ -0.67
CLIP3-205ENST00000592017 VMA21Q3ZAQ7 101 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 TMEM177Q53S58 311 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 FOXB2Q5VYV0 432 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 TMEM65Q6PI78 240 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 ETV3LQ6ZN32 361 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 ZNF695Q8IW36 515 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 ARPC1AQ92747 370 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 DUX3Q96PT4 197 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 GPHA2Q96T91 129 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 SLC5A7Q9GZV3 580 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 CCL28Q9NRJ3 127 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 SCOCQ9UIL1 159 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 ZNF580Q9UK33 172 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 ANAPC10Q9UM13 185 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
CLIP3-205ENST00000592017 SRRM4A7MD48 611 aaKnown RBP10.88□□□□□ -0.67
CLIP3-205ENST00000592017 CNIH1O95406 144 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 HLA-DMAP28067 261 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 RFX2P48378 723 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 TMBIM6P55061 237 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 FXYD3Q14802 87 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 UNQ5815/PRO19632Q6UWF5 114 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 ZNF562Q6V9R5 426 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 IDO2Q6ZQW0 420 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 REC114Q7Z4M0 266 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 PPP1R27Q86WC6 154 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 LINC00482Q8N8I6 264 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 GPX8Q8TED1 209 aa10.88□□□□□ -0.67
CLIP3-205ENST00000592017 HSD17B10Q99714 261 aaKnown RBP10.88□□□□□ -0.67
CLIP3-205ENST00000592017 AURKAIP1Q9NWT8 199 aaPredicted RBP10.88□□□□□ -0.67
CLIP3-205ENST00000592017 ARPC1BO15143 372 aaKnown RBP10.87□□□□□ -0.67
CLIP3-205ENST00000592017 PSMB8P28062 276 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 PPIFP30405 207 aaKnown RBP10.87□□□□□ -0.67
CLIP3-205ENST00000592017 RCVRNP35243 200 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 HRH1P35367 487 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 RAB25P57735 213 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 PJVKQ0ZLH3 352 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 DEFB136Q30KP8 78 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 OVCH2Q7RTZ1 564 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 LAX1Q8IWV1 398 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 MRPL41Q8IXM3 137 aaKnown RBP10.87□□□□□ -0.67
CLIP3-205ENST00000592017 MFSD4AQ8N468 514 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 LFNGQ8NES3 379 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 OR4S2Q8NH73 311 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 OSR1Q8TAX0 266 aaPredicted RBP10.87□□□□□ -0.67
CLIP3-205ENST00000592017 CASTOR1Q8WTX7 329 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 GIMAP1Q8WWP7 306 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 BCL7BQ9BQE9 202 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 ZNF2Q9BSG1 426 aaPredicted RBP10.87□□□□□ -0.67
CLIP3-205ENST00000592017 KLK15Q9H2R5 256 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 SCPEP1Q9HB40 452 aa10.87□□□□□ -0.67
CLIP3-205ENST00000592017 FOXA2Q9Y261 457 aaPredicted RBP10.87□□□□□ -0.67
CLIP3-205ENST00000592017 CCDC160A6NGH7 325 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 H3BMQ9 156 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 CRYGBP07316 175 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 SAA1P0DJI8 122 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-205ENST00000592017 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-205ENST00000592017 NAT1P18440 290 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 CRIP2P52943 208 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-205ENST00000592017 KRTAP10-11P60412 298 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 UBE2KP61086 200 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 TMEM267Q0VDI3 215 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-205ENST00000592017 EIF4EBP1Q13541 118 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-205ENST00000592017 DYRK1AQ13627 763 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 ACTBL2Q562R1 376 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 ZNF66Q6ZN08 573 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
CLIP3-205ENST00000592017 RNF152Q8N8N0 203 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms