RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SRD5A3Q9H8P0 318 aa5.89□□□□□ -1.47
VMP1-213ENST00000591877 MRPS28Q9Y2Q9 187 aaKnown RBP5.89□□□□□ -1.47
VMP1-213ENST00000591877 OR2W1Q9Y3N9 320 aa5.89□□□□□ -1.47
VMP1-213ENST00000591877 AMMECR1Q9Y4X0 333 aaPredicted RBP5.89□□□□□ -1.47
VMP1-213ENST00000591877 IGHV3-43A0A0B4J1X8 118 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 IGHV1-3A0A0C4DH29 117 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 TEX13DA0A0J9YY54 714 aaPredicted RBP5.88□□□□□ -1.47
VMP1-213ENST00000591877 CCDC160A6NGH7 325 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 C12orf77C9JDV5 145 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 SLC31A2O15432 143 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 ORC5O43913 435 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 NOL3O60936 208 aaKnown RBP5.88□□□□□ -1.47
VMP1-213ENST00000591877 IGHV3-43DP0DP04 118 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 GZMHP20718 246 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 RAB7AP51149 207 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 ARHGDIBP52566 201 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 TAS2R43P59537 309 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 ZNF816Q0VGE8 651 aaPredicted RBP5.88□□□□□ -1.47
VMP1-213ENST00000591877 MADCAM1Q13477 382 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 EBI3Q14213 229 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 CNPY1Q3B7I2 92 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 LBHQ53QV2 105 aaPredicted RBP5.88□□□□□ -1.47
VMP1-213ENST00000591877 FAM27D1Q5T7N8 215 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 UBE2UQ5VVX9 321 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 CDH26Q8IXH8 852 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 GAPTQ8N292 157 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 STX19Q8N4C7 294 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 JAGN1Q8N5M9 183 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 LINC00311Q8N616 119 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 Q8N6K4 173 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 C5orf56Q8N8D9 126 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 ZNF439Q8NDP4 499 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 WFDC9Q8NEX5 89 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 OR4F17Q8NGA8 305 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 OR52M1Q8NGK5 317 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 OR4K15Q8NH41 348 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 ARL11Q969Q4 196 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 OR4F4Q96R69 305 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 S100A13Q99584 98 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 BCL7BQ9BQE9 202 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 SPXQ9BT56 116 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 CCDC90BQ9GZT6 254 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 Q9H8V8 135 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 GSN-AS1Q9NRJ2 163 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 PTTG2Q9NZH5 202 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 CKLFQ9UBR5 152 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 RSL24D1Q9UHA3 163 aaKnown RBP5.88□□□□□ -1.47
VMP1-213ENST00000591877 LSM2Q9Y333 95 aaKnown RBP5.88□□□□□ -1.47
VMP1-213ENST00000591877 MOB4Q9Y3A3 225 aa5.88□□□□□ -1.47
VMP1-213ENST00000591877 IGHV3-72A0A0B4J1Y9 119 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 TCRBV4S1A1TA0A5B7 111 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 ZNF736B4DX44 427 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 M0QZK8 103 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 AIPO00170 330 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 CCRL2O00421 344 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 SDCBPO00560 298 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 HSD17B6O14756 317 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 MYL12BO14950 172 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 SC5DO75845 299 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 IGKV1D-33P01593 117 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 IGKV1-33P01594 117 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 PRSS2P07478 247 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 MGMTP16455 207 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 RCC1P18754 421 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 REG1BP48304 166 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 TMBIM6P55061 237 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 CX3CL1P78423 397 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 GPR176Q14439 515 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 AARDQ4LEZ3 155 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 SYT6Q5T7P8 510 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 RNLSQ5VYX0 342 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 AWAT2Q6E213 333 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 LRRTM1Q86UE6 522 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 CLVS1Q8IUQ0 354 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 C8orf31Q8N9H6 132 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 THAP8Q8NA92 274 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 OR10X1Q8NGY0 326 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 OR1L1Q8NH94 360 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 NEK7Q8TDX7 302 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 RAB2BQ8WUD1 216 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 RTN4IP1Q8WWV3 396 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 ISOC1Q96CN7 298 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 MRPS24Q96EL2 167 aaKnown RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 NOL4LQ96MY1 436 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 ATG101Q9BSB4 218 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 SELENOIQ9C0D9 397 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 ACOT13Q9NPJ3 140 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 PLSCR3Q9NRY6 295 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 GPR132Q9UNW8 380 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 TSSC4Q9Y5U2 329 aaPredicted RBP5.87□□□□□ -1.47
VMP1-213ENST00000591877 PEX16Q9Y5Y5 336 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 DNAH3Q8TD57 4116 aa5.87□□□□□ -1.47
VMP1-213ENST00000591877 COL7A1Q02388 2944 aa5.86□□□□□ -1.47
VMP1-213ENST00000591877 MCRIP1C9JLW8 97 aa5.86□□□□□ -1.47
VMP1-213ENST00000591877 FGF16O43320 207 aa5.86□□□□□ -1.47
VMP1-213ENST00000591877 IGHG2P01859 326 aa5.86□□□□□ -1.47
VMP1-213ENST00000591877 HBZP02008 142 aa5.86□□□□□ -1.47
VMP1-213ENST00000591877 GAPDHP04406 335 aaKnown RBP5.86□□□□□ -1.47
VMP1-213ENST00000591877 CD37P11049 281 aa5.86□□□□□ -1.47
VMP1-213ENST00000591877 IGLL1P15814 213 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms