RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 IGHV1-8P0DP01 117 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 HKR1P10072 659 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 SSTR5P35346 364 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 CFHR2P36980 270 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ADORA2A-AS1P86434 159 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 PVRIGQ6DKI7 326 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 DPPA3Q6W0C5 159 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 C1QL2Q7Z5L3 287 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 TMEM179BQ7Z7N9 219 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 NHLRC2Q8NBF2 726 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 OR4X1Q8NH49 305 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 ZNF488Q96MN9 340 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 AICDAQ9GZX7 198 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 PRDM13Q9H4Q3 707 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 MAP1BP46821 2468 aaKnown RBP5.27□□□□□ -1.57
SMAD4-212ENST00000591126 TSC2P49815 1807 aa5.27□□□□□ -1.57
SMAD4-212ENST00000591126 IGHV3OR16-10A0A075B7F0 116 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 IGSF23A1L1A6 192 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 H3BUX3 64 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 GAPTQ8N292 157 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 C10orf105Q8TEF2 133 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 GALNT14Q96FL9 552 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 ANKRD36A6QL64 1941 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 CACNA1IQ9P0X4 2223 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 PPP1R17O96001 155 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 MMP7P09237 267 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-212ENST00000591126 ORM2P19652 201 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 REG1BP48304 166 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 NECAP1Q8NC96 275 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 FAM213BQ8TBF2 198 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 MANBALQ9NQG1 85 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 FBLN5Q9UBX5 448 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 RCL1Q9Y2P8 373 aaKnown RBP5.26□□□□□ -1.57
SMAD4-212ENST00000591126 IGLV3-9A0A075B6K5 115 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 IGHV2-26A0A0B4J1V2 119 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 TMEM89A2RUT3 159 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 RRHO14718 337 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 KLF4O43474 513 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 RAMP1O60894 148 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 CLPSP04118 112 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 GPX4P36969 197 aaPredicted RBP5.26□□□□□ -1.57
SMAD4-212ENST00000591126 GLIPR1P48060 266 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 SOHLH1Q5JUK2 328 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 MED9Q9NWA0 146 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 MYOFQ9NZM1 2061 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 RGS13O14921 159 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 DEDDO75618 318 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 IGHV2-70P01814 119 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 NPBWR2P48146 333 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 HIST1H3AP68431 136 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 HIST2H3PS2Q5TEC6 136 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 BTNL8Q6UX41 500 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 HIST2H3AQ71DI3 136 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 CCL28Q9NRJ3 127 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 CNTRLQ7Z7A1 2325 aa5.26□□□□□ -1.57
SMAD4-212ENST00000591126 F5H697 171 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 DCTN6O00399 190 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 GABRB1P18505 474 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 RND3P61587 244 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 ZNRF1Q8ND25 227 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 TMED6Q8WW62 240 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 SMIM3Q9BZL3 60 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 VPREB3Q9UKI3 123 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 TECTAO75443 2155 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 CTDSP2O14595 271 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 NDUFB8O95169 186 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 IL6RP08887 468 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 SCTP09683 121 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 UBE2L3P68036 154 aaKnown RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 LGALSLQ3ZCW2 172 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 LDLRAD2Q5SZI1 272 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 LINC01590Q5TEZ4 76 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 WFDC3Q8IUB2 231 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 LAX1Q8IWV1 398 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 KCNRGQ8N5I3 272 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 DRAM1Q8N682 238 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 OR4C16Q8NGL9 310 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 TMEM167AQ8TBQ9 72 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 ATG101Q9BSB4 218 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 SLC2A9Q9NRM0 540 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 TMEM140Q9NV12 185 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 APC2O95996 2303 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 ASXL3Q9C0F0 2248 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 MAGEB4O15481 346 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 FSTL3O95633 263 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 SULT1A1P50225 295 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 SAPCD1Q5SSQ6 148 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 FOXB2Q5VYV0 432 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 KCNS1Q96KK3 526 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 C11orf54Q9H0W9 315 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 LINC01619G3V211 115 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 UBE2L6O14933 153 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 PTBP3O95758 552 aaKnown RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 CDC34P49427 236 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-212ENST00000591126 DLK1P80370 383 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 PAX5Q02548 391 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 DHRS2Q13268 280 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 HIST3H3Q16695 136 aa5.25□□□□□ -1.57
SMAD4-212ENST00000591126 PQLC2Q6ZP29 291 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms