RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 IGHV3-43DP0DP04 118 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 ASCL1P50553 236 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 EDDM3BP56851 147 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 UBE2KP61086 200 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 ERVK-16P61578 105 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 HOXA4Q00056 320 aaPredicted RBP8.25□□□□□ -1.09
VPS25-202ENST00000589219 ATP6V1FQ16864 119 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 MORN2Q502X0 79 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 DHRS7BQ6IAN0 325 aaPredicted RBP8.25□□□□□ -1.09
VPS25-202ENST00000589219 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 H2BFWTQ7Z2G1 175 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 ZNF525Q8N782 197 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 CLRN3Q8NCR9 226 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 RBMXL1Q96E39 390 aaKnown RBP8.25□□□□□ -1.09
VPS25-202ENST00000589219 GAFA1Q96PS6 74 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 AGMATQ9BSE5 352 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 RBKSQ9H477 322 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 ESRP2Q9H6T0 727 aaKnown RBP8.25□□□□□ -1.09
VPS25-202ENST00000589219 KIAA1456Q9P272 454 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 TIMM9Q9Y5J7 89 aa8.25□□□□□ -1.09
VPS25-202ENST00000589219 CHD3Q12873 2000 aaKnown RBP8.25□□□□□ -1.09
VPS25-202ENST00000589219 ZNF729A6NN14 1252 aaPredicted RBP8.24□□□□□ -1.09
VPS25-202ENST00000589219 FAM90A27PA6NNH2 459 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 C17orf98A8MV24 154 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 SIGLEC5O15389 551 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 RAMP3O60896 148 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 HPRT1P00492 218 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 CGB3P0DN86 165 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 CGB7P0DN87 165 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 DUTP33316 252 aaKnown RBP8.24□□□□□ -1.09
VPS25-202ENST00000589219 G6PCP35575 357 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 RIPPLY3P57055 190 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 LOXL3P58215 753 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 SLC38A11Q08AI6 406 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 IZUMO4Q1ZYL8 232 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 AARDQ4LEZ3 155 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 OR2B11Q5JQS5 317 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 BTNL3Q6UXE8 466 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 ZNF788Q6ZQV5 615 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 C1orf87Q8N0U7 546 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 RFESDQ8TAC1 157 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 R3HDM4Q96D70 268 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 ADTRPQ96IZ2 230 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 DCTN5Q9BTE1 182 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 ABHD14AQ9BUJ0 271 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 TMEM147Q9BVK8 224 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 EGLN1Q9GZT9 426 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 IFI27L2Q9H2X8 130 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 LINC00574Q9H8X3 128 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 UNKLQ9H9P5 680 aaKnown RBP8.24□□□□□ -1.09
VPS25-202ENST00000589219 GFOD1Q9NXC2 390 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 PRELID3BQ9Y3B1 194 aa8.24□□□□□ -1.09
VPS25-202ENST00000589219 CCDC168Q8NDH2 2452 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 TRAV1-1A0A0B4J248 108 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 KBTBD11-OT1A0A1B0GTJ5 212 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 LOC105371267A0A1B0GV96 52 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 DPRXA6NFQ7 191 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 FAM74A7A6NL05 159 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 MARCH11A6NNE9 402 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 LINC00473A8K010 186 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 C17orf100A8MU93 164 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 M0R1X1 148 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 KRASP01116 189 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 THBDP07204 575 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 OR4A8P0C604 315 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 METTL15P1P0C7V9 234 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 IGFBP2P18065 325 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 ATF4P18848 351 aaPredicted RBP8.23□□□□□ -1.09
VPS25-202ENST00000589219 THBS3P49746 956 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 FHITP49789 147 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 PPT1P50897 306 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 SERF2P84101 59 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 RUNX1Q01196 453 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 BSPH1Q075Z2 132 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 TFF3Q07654 80 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 ADIPOQQ15848 244 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 C17orf58Q2M2W7 97 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 LRRC75BQ2VPJ9 315 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 FAM74A3Q4VXF1 159 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 SPRNQ5BIV9 151 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 SPANXN5Q5MJ07 72 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 HAPLN4Q86UW8 402 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 DMRTC2Q8IXT2 367 aaPredicted RBP8.23□□□□□ -1.09
VPS25-202ENST00000589219 ZNRF1Q8ND25 227 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 OR10A7Q8NGE5 316 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 OR4S2Q8NH73 311 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 DTD1Q8TEA8 209 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 CORO2AQ92828 525 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 PINX1Q96BK5 328 aaKnown RBP8.23□□□□□ -1.09
VPS25-202ENST00000589219 CLCC1Q96S66 551 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 SCRT1Q9BWW7 348 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 EIF5A2Q9GZV4 153 aaKnown RBP8.23□□□□□ -1.09
VPS25-202ENST00000589219 IDI2-AS1Q9NZ38 188 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 CLN8Q9UBY8 286 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 NDRG3Q9UGV2 375 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 F8P00451 2351 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 POLQO75417 2590 aa8.23□□□□□ -1.09
VPS25-202ENST00000589219 MED13LQ71F56 2210 aa8.22□□□□□ -1.09
VPS25-202ENST00000589219 TRAV38-1A0A0B4J264 116 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms