RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 IFNA2P01563 188 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 SERPINE2P07093 398 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 RPL30P62888 115 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 EBI3Q14213 229 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 C16orf82Q7Z2V1 217 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 SPAG16Q8N0X2 631 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 CAPSLQ8WWF8 208 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 MARVELD1Q9BSK0 173 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 RAB18Q9NP72 206 aa13.64□□□□□ -0.23
SCAMP4-211ENST00000588907 A0A0A6YYJ9 748 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 DHFRP00374 187 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 HPRT1P00492 218 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 IGKV1D-33P01593 117 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 IGKV1-33P01594 117 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 SNRNP70P08621 437 aaKnown RBP13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 IER3P46695 156 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 LGALS7P47929 136 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 HES1Q14469 280 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 TRIM16LQ309B1 348 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 GLDNQ6ZMI3 551 aaPredicted RBP13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 SIGLECL1Q8N7X8 197 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 ADAD2Q8NCV1 583 aaKnown RBP13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 TMEM230Q96A57 120 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 TSNAXQ99598 290 aaKnown RBP13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 PLEKHA2Q9HB19 425 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 C1RLQ9NZP8 487 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 TCF19Q9Y242 345 aa13.63□□□□□ -0.23
SCAMP4-211ENST00000588907 INMT-MINDY4F8WBC2 141 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 H3BUX3 64 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 SPDEFO95238 335 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 HRASP01112 189 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 HLA-AP01891 365 aaKnown RBP13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 OR4E1P0C645 316 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 UCP1P25874 307 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 C4orf46Q504U0 113 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 TMEM177Q53S58 311 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 CCBE1Q6UXH8 406 aaPredicted RBP13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 ZNF48Q96MX3 618 aaPredicted RBP13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 TMEM222Q9H0R3 208 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 GPN1Q9HCN4 374 aaPredicted RBP13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 VPREB3Q9UKI3 123 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 FLVCR2Q9UPI3 526 aa13.62□□□□□ -0.23
SCAMP4-211ENST00000588907 MTORP42345 2549 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 IGHV3-72A0A0B4J1Y9 119 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 MDFIC2A0A1B0GVS7 189 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 CLDN34H7C241 214 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 M0QZK8 103 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 SHOXO15266 292 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 SFT2D2O95562 160 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 CRYZL1O95825 349 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 IGKV1-16P04430 117 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 IL5P05113 134 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 OR5AC1P0C628 307 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 TMEM11P17152 192 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 ANXA7P20073 488 aaKnown RBP13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 VAMP1P23763 118 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 OXA1LQ15070 435 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 VSTM2AQ8TAG5 236 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 CHPT1Q8WUD6 406 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 IL22RA2Q969J5 263 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 EAF1Q96JC9 268 aaPredicted RBP13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 HARBI1Q96MB7 349 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 GPHA2Q96T91 129 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 SOX21Q9Y651 276 aaPredicted RBP13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 MXRA5Q9NR99 2828 aa13.61□□□□□ -0.23
SCAMP4-211ENST00000588907 OR2F2O95006 317 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 NQO2P16083 231 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 ERVK-16P61578 105 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 RPS16P62249 146 aaKnown RBP13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 DHRS2Q13268 280 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 PPP1R1AQ13522 171 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 OR2B11Q5JQS5 317 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 LYG2Q86SG7 212 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 CADM3Q8N126 398 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 Q8N6K4 173 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 COQ8AQ8NI60 647 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 TP53RKQ96S44 253 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 KIAA1456Q9P272 454 aa13.6□□□□□ -0.23
SCAMP4-211ENST00000588907 DUXBA0A1W2PPF3 345 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 C9orf170A2RU37 121 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 A6NDX4 124 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 HOXA3O43365 443 aaPredicted RBP13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 CREBL2O60519 120 aaPredicted RBP13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 RAMP3O60896 148 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 DUS4LO95620 317 aaKnown RBP13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 CDS2O95674 445 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 IGHV4-59P01825 116 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 PAX6P26367 422 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 RAB25P57735 213 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 LINC00205P59089 165 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 HILS1P60008 231 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 RPL15P61313 204 aaKnown RBP13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 SUPT4H1P63272 117 aaKnown RBP13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 POU2AF1Q16633 256 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 VMA21Q3ZAQ7 101 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 LGI3Q8N145 548 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 NPBQ8NG41 125 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 PIFOQ8TCI5 191 aa13.59□□□□□ -0.23
SCAMP4-211ENST00000588907 TMEM56Q96MV1 263 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms