RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 THNSL2Q86YJ6 484 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 SIGLECL1Q8N7X8 197 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 OR4C13Q8NGP0 309 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 OR2T10Q8NGZ9 312 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 OR4S2Q8NH73 311 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 CASTOR1Q8WTX7 329 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 CHPT1Q8WUD6 406 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 ZNF48Q96MX3 618 aaPredicted RBP11.35□□□□□ -0.59
CCDC130-208ENST00000588071 TP53RKQ96S44 253 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
CCDC130-208ENST00000588071 HIVEP2P31629 2446 aa11.35□□□□□ -0.59
CCDC130-208ENST00000588071 TLN2Q9Y4G6 2542 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 C9orf170A2RU37 121 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 FAM90A9PA6NNJ1 464 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 H3BUX3 64 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 RAMP3O60896 148 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 HPRT1P00492 218 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 MOSP00540 346 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 IL5P05113 134 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 TMEM11P17152 192 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 IER3P46695 156 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 MECP2P51608 486 aaKnown RBP11.34□□□□□ -0.59
CCDC130-208ENST00000588071 BRWD1-AS2P59051 145 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 SUPT4H1P63272 117 aaKnown RBP11.34□□□□□ -0.59
CCDC130-208ENST00000588071 DHRS2Q13268 280 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 HABP2Q14520 560 aaPredicted RBP11.34□□□□□ -0.59
CCDC130-208ENST00000588071 DHRS7BQ6IAN0 325 aaPredicted RBP11.34□□□□□ -0.59
CCDC130-208ENST00000588071 LYG2Q86SG7 212 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 RBMXL1Q96E39 390 aaKnown RBP11.34□□□□□ -0.59
CCDC130-208ENST00000588071 GALNT14Q96FL9 552 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 EAF1Q96JC9 268 aaPredicted RBP11.34□□□□□ -0.59
CCDC130-208ENST00000588071 SEC22CQ9BRL7 303 aa11.34□□□□□ -0.59
CCDC130-208ENST00000588071 FAM212BQ9NTI7 297 aaPredicted RBP11.34□□□□□ -0.59
CCDC130-208ENST00000588071 RBFOX2O43251 390 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC130-208ENST00000588071 PRAF2O60831 178 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 RPA2P15927 270 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 TMEM187Q14656 261 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 LY6EQ16553 131 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 ZNF585BQ52M93 769 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 ZNF695Q8IW36 515 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 OR52B4Q8NGK2 314 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 OR5R1Q8NH85 324 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 GLYATL2Q8WU03 294 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 RNF5Q99942 180 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 AIFM2Q9BRQ8 373 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 PRDM13Q9H4Q3 707 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 OTOGQ6ZRI0 2925 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 F8P00451 2351 aa11.33□□□□□ -0.6
CCDC130-208ENST00000588071 NAV3Q8IVL0 2385 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 HOXA3O43365 443 aaPredicted RBP11.32□□□□□ -0.6
CCDC130-208ENST00000588071 CRLF1O75462 422 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 HRASP01112 189 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 IGHV4-59P01825 116 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 UCP1P25874 307 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 LGALS7P47929 136 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 SRPXP78539 464 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 EBI3Q14213 229 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 TMEM177Q53S58 311 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 LGI3Q8N145 548 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 COQ8AQ8NI60 647 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 OSR1Q8TAX0 266 aaPredicted RBP11.32□□□□□ -0.6
CCDC130-208ENST00000588071 PIFOQ8TCI5 191 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 ZNF431Q8TF32 576 aaPredicted RBP11.32□□□□□ -0.6
CCDC130-208ENST00000588071 ZNF418Q8TF45 676 aaPredicted RBP11.32□□□□□ -0.6
CCDC130-208ENST00000588071 SSMEM1Q8WWF3 244 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 RITA1Q96K30 269 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 HARBI1Q96MB7 349 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 TSNAXQ99598 290 aaKnown RBP11.32□□□□□ -0.6
CCDC130-208ENST00000588071 PHB2Q99623 299 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 PLEKHA2Q9HB19 425 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 PRR13Q9NZ81 148 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 PITPNC1Q9UKF7 332 aa11.32□□□□□ -0.6
CCDC130-208ENST00000588071 ZANQ9Y493 2812 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 SONP18583 2426 aaKnown RBP11.31□□□□□ -0.6
CCDC130-208ENST00000588071 PIGBOS1A0A0B4J2F0 54 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
CCDC130-208ENST00000588071 ATG12O94817 140 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 S1PR2O95136 353 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 CDS2O95674 445 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 FAM157CP0CG43 387 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 NQO2P16083 231 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 ERVK-16P61578 105 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 TATDN3Q17R31 274 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 ANKRD55Q3KP44 614 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 TMEM268Q5VZI3 342 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 SELENOHQ8IZQ5 122 aaKnown RBP11.31□□□□□ -0.6
CCDC130-208ENST00000588071 UXS1Q8NBZ7 420 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 DMBX1Q8NFW5 382 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 RNASE11Q8TAA1 199 aaKnown RBP11.31□□□□□ -0.6
CCDC130-208ENST00000588071 R3HDM4Q96D70 268 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 TMEM56Q96MV1 263 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 C1RLQ9NZP8 487 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 COMMD9Q9P000 198 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 KIAA1456Q9P272 454 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 TCF19Q9Y242 345 aa11.31□□□□□ -0.6
CCDC130-208ENST00000588071 TMEM56-RWDD3S4R434 201 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms