RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 RAB39BQ96DA2 213 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 RBMXL1Q96E39 390 aaKnown RBP8.3□□□□□ -1.08
APOC1-201ENST00000586638 MRPL20Q9BYC9 149 aaKnown RBP8.3□□□□□ -1.08
APOC1-201ENST00000586638 MAGT1Q9H0U3 335 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 TMEM133Q9H2Q1 129 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 CACNG5Q9UF02 275 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 GAB2Q9UQC2 676 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 POMT1Q9Y6A1 747 aa8.3□□□□□ -1.08
APOC1-201ENST00000586638 J3QR06 171 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 GPR37O15354 613 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 BCL2L11O43521 198 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 SSSCA1O60232 199 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 OR2F2O95006 317 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 LIPFP07098 398 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 S100A11P31949 105 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 KIR2DS2P43631 304 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 THBS3P49746 956 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 OR2F1Q13607 317 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 ZNF345Q14585 488 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 Q6ZRM9 215 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 KCNRGQ8N5I3 272 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 TCTEX1D1Q8N7M0 179 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 ZNF383Q8NA42 475 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 LY6G5BQ8NDX9 201 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 OR8H1Q8NGG4 311 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 DDB2Q92466 427 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 GON7Q9BXV9 100 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 FAM212BQ9NTI7 297 aaPredicted RBP8.29□□□□□ -1.08
APOC1-201ENST00000586638 PRELID3BQ9Y3B1 194 aa8.29□□□□□ -1.08
APOC1-201ENST00000586638 LOC105371242A0A075B767 164 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 A0A087X0M5 115 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 IGHV2-26A0A0B4J1V2 119 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 A0A0D9SG52 128 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 A0A1B0GX30 115 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 A0A1W2PPH5 198 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 KRASP01116 189 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 P0C879 139 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 PAX1P15863 534 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 NUP62P37198 522 aaPredicted RBP8.28□□□□□ -1.08
APOC1-201ENST00000586638 REG1BP48304 166 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 ATP5J2P56134 94 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 POLR2GP62487 172 aaKnown RBP eCLIP8.28□□□□□ -1.08
APOC1-201ENST00000586638 KLRD1Q13241 179 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 DIAPH2-AS1Q14236 149 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 CXorf66Q5JRM2 361 aaPredicted RBP8.28□□□□□ -1.08
APOC1-201ENST00000586638 ZNF833PQ6ZTB9 187 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 ACOT7LQ6ZUV0 252 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 SSX9Q7RTT3 188 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 ABHD12Q8N2K0 398 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 LINC00311Q8N616 119 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 INO80EQ8NBZ0 244 aaPredicted RBP8.28□□□□□ -1.08
APOC1-201ENST00000586638 DMBX1Q8NFW5 382 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 OR10X1Q8NGY0 326 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 OR4S2Q8NH73 311 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 OR9G1Q8NH87 305 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 ZNF596Q8TC21 504 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 R3HDM4Q96D70 268 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 AQP10Q96PS8 301 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 S1PR3Q99500 378 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 PIMREGQ9BSJ6 248 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 C11orf1Q9H5F2 150 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 MMP24Q9Y5R2 645 aa8.28□□□□□ -1.08
APOC1-201ENST00000586638 TET2Q6N021 2002 aaPredicted RBP8.28□□□□□ -1.08
APOC1-201ENST00000586638 HIVEP2P31629 2446 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 PIGBOS1A0A0B4J2F0 54 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 A0A1B0GU03 582 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 KANTRA0A1W2PQU2 76 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 MARCH11A6NNE9 402 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 WRBO00258 174 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 ST8SIA3O43173 380 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 PITX3O75364 302 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 CRYZL1O95825 349 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 CFDP00746 253 aaPredicted RBP8.27□□□□□ -1.09
APOC1-201ENST00000586638 RBP4P02753 201 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 RLN2P04090 185 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 CT45A6P0DMU7 189 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 CT45A5P0DMU8 189 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 CT45A7P0DMV0 189 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 HKR1P10072 659 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 SLC25A6P12236 298 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 C4BPBP20851 252 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 ZFP36P26651 326 aaKnown RBP8.27□□□□□ -1.09
APOC1-201ENST00000586638 OR2B8PP59922 312 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 LCN2P80188 198 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 MIDNQ504T8 468 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 PNKDQ8N490 385 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 Q8N7P7 452 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 C8orf31Q8N9H6 132 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 FAM168AQ92567 244 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 ADTRPQ96IZ2 230 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 CLEC7AQ9BXN2 247 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 ZC4H2Q9NQZ6 224 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 SIRT7Q9NRC8 400 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 SLC35D1Q9NTN3 355 aa8.27□□□□□ -1.09
APOC1-201ENST00000586638 A8MXK9 166 aa8.26□□□□□ -1.09
APOC1-201ENST00000586638 E5RGE8 158 aa8.26□□□□□ -1.09
APOC1-201ENST00000586638 M0R1W7 72 aa8.26□□□□□ -1.09
APOC1-201ENST00000586638 TOR1AO14656 332 aa8.26□□□□□ -1.09
APOC1-201ENST00000586638 RBFOX2O43251 390 aaKnown RBP eCLIP8.26□□□□□ -1.09
APOC1-201ENST00000586638 ENSAO43768 121 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms